CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93274	Canola	cytosol	40.72	65.33
CDX74856	Canola	cytosol	78.95	61.96
CDY06998	Canola	cytosol	34.9	60.58
CDY24969	Canola	cytosol	68.14	54.19
CDY07657	Canola	cytosol	67.87	53.96
CDX93273	Canola	cytosol	62.88	49.78
CDY07000	Canola	cytosol	60.94	49.77
CDY06999	Canola	cytosol	41.83	47.48
AT2G39330.2	Thale cress	cytosol	65.93	46.94
CDY38589	Canola	cytosol	58.45	46.07
CDX93275	Canola	cytosol	52.08	41.96
CDY06997	Canola	cytosol	51.8	41.74
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	18.84	32.54
CDX90860	Canola	cytosol	34.35	32.12
CDY54394	Canola	cytosol	8.86	32.0
CDY20195	Canola	cytosol	37.4	31.84
CDY20197	Canola	cytosol	17.45	30.58
CDY59556	Canola	cytosol	37.12	29.98
CDY21999	Canola	extracellular	13.57	28.32
CDY45640	Canola	cytosol	23.82	28.01
CDX79175	Canola	cytosol	23.55	27.96
CDY02548	Canola	cytosol	32.41	26.9
CDY68611	Canola	cytosol	18.84	25.66
CDX77840	Canola	cytosol	6.65	25.26
CDX82402	Canola	cytosol, plasma membrane	20.78	25.25
CDX82401	Canola	cytosol	18.56	25.19
CDY53520	Canola	cytosol	20.22	24.91
CDX82963	Canola	cytosol	28.53	24.58
CDY70857	Canola	cytosol	28.53	24.58
CDY45301	Canola	cytosol	19.94	24.57
CDY46535	Canola	cytosol	25.76	24.16
CDY28362	Canola	cytosol, nucleus, plastid	14.4	23.96
CDY53442	Canola	cytosol	26.04	23.8
CDY22879	Canola	cytosol	28.53	23.79
CDY32783	Canola	cytosol	33.24	22.94
CDY65744	Canola	peroxisome	18.01	22.89
CDY72239	Canola	cytosol	19.67	22.83
CDY47758	Canola	cytosol	33.52	22.79
CDX75882	Canola	cytosol	17.17	21.68
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	33.8	21.67
CDY69096	Canola	cytosol	34.9	21.54
CDY60590	Canola	cytosol	34.63	21.37
CDX92074	Canola	cytosol	37.12	20.62
CDY40959	Canola	cytosol	27.7	19.61
CDY70821	Canola	cytosol	24.1	19.42
CDY43099	Canola	cytosol	36.01	19.2
CDY28360	Canola	cytosol	8.86	18.82
CDY13177	Canola	extracellular	15.79	18.04
CDY43910	Canola	cytosol	36.84	17.92
CDY63700	Canola	cytosol	25.48	15.73
CDX96652	Canola	extracellular	25.48	14.96
CDY59365	Canola	cytosol	30.75	13.91
CDY51197	Canola	cytosol	33.8	13.59
CDY51196	Canola	cytosol	34.9	13.55
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	5.54	13.42
CDY02564	Canola	cytosol	34.63	13.35
CDY22878	Canola	cytosol	33.24	12.22
CDX87871	Canola	cytosol	31.02	12.19
CDY51195	Canola	cytosol, extracellular	34.9	11.84
CDY47825	Canola	cytosol	25.76	11.73
CDY02563	Canola	cytosol, extracellular	34.35	11.7
CDY48032	Canola	cytosol, extracellular, nucleus	5.82	9.13
CDX82115	Canola	extracellular	5.82	8.4
CDY47824	Canola	cytosol	6.65	6.72
CDY43090	Canola	cytosol	3.32	4.33
CDY34134	Canola	cytosol	0.83	1.44

Protein Annotations

EnsemblPlants:CDY44637	EnsemblPlantsGene:GSBRNA2T00080593001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY44637	ProteinID:CDY44637.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EE2E48	UniProt:A0A078I3L5	MapMan:35.1	:

Description

BnaC04g06250DBnaC04g06250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3L5]

Coordinates

chrLK032597:-:169204..170973

Molecular Weight (calculated)

39267.7 Da

IEP (calculated)

7.006

GRAVY (calculated)

-0.286

Length

361 amino acids

Sequence
(BLAST)

001: MSHEPVNIGL PKLASKKFTY HGSPTMGIKH RHIMRQKVAA DDNRGCSGRP TKHLSKHLLS LTSSTGPASS STGPKIVGFH GRSGDALDAL GVYFVHDSLT
101: TSLPPLYKLD AQGGTEGLIW DDGSYDAVKT LRICQDDCRI AYLEFEYDKG GKSEKFQHGV KGGTPAEFVL DYPDEYIKTV EATYDKPKLF QNTVITSLTF
201: QTSKGRASFF GYKVGKKFVL EQKDRRLVGF HGTEGDAIDA LGAYFAPIPA PTPLIPAKKL PSKIYVGQGN DGVSFVKFEY IKGTSLVTGD DHGKMTLLGA
301: EEFVLEDGEY LTALVGYYDK IFGVEEPFTL GENGQKIVGF HGQASDVIHS VGVTVVPITT E

Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)

001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE

Arabidopsis Description

JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.