Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 4
- peroxisome 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G39310.4 | Thale cress | cytosol | 73.77 | 81.66 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 46.94 | 65.93 |
| AT3G16450.2 | Thale cress | cytosol | 28.99 | 49.0 |
| AT3G16470.1 | Thale cress | cytosol | 41.62 | 46.78 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 20.12 | 46.15 |
| AT3G16420.1 | Thale cress | cytosol | 26.63 | 45.3 |
| AT2G25980.1 | Thale cress | cytosol | 40.04 | 45.21 |
| AT3G16430.2 | Thale cress | cytosol | 25.84 | 44.26 |
| AT3G16440.2 | Thale cress | cytosol | 27.81 | 43.65 |
| AT1G52100.1 | Thale cress | cytosol | 36.49 | 42.33 |
| AT3G21380.1 | Thale cress | cytosol | 37.67 | 41.52 |
| AT5G35940.1 | Thale cress | cytosol | 35.9 | 40.99 |
| AT5G28520.1 | Thale cress | cytosol | 36.09 | 40.4 |
| AT5G35950.1 | Thale cress | cytosol | 34.52 | 39.41 |
| AT1G61230.1 | Thale cress | cytosol | 35.31 | 35.45 |
| AT5G46000.1 | Thale cress | cytosol | 27.42 | 35.1 |
| AT1G52060.1 | Thale cress | extracellular | 21.7 | 35.03 |
| AT1G52050.1 | Thale cress | extracellular | 21.1 | 34.19 |
| AT1G52070.1 | Thale cress | extracellular | 20.32 | 32.7 |
| AT1G60095.1 | Thale cress | cytosol | 36.88 | 31.11 |
| AT1G52030.2 | Thale cress | cytosol | 39.05 | 30.84 |
| AT1G52120.2 | Thale cress | cytosol | 27.81 | 30.72 |
| AT1G60110.2 | Thale cress | cytosol | 37.48 | 30.55 |
| AT1G57570.1 | Thale cress | mitochondrion | 36.29 | 29.97 |
| AT5G49870.1 | Thale cress | cytosol | 34.71 | 29.28 |
| AT1G60130.1 | Thale cress | cytosol | 34.52 | 29.17 |
| AT5G38550.1 | Thale cress | cytosol | 33.73 | 28.79 |
| AT1G52110.1 | Thale cress | mitochondrion | 34.91 | 28.78 |
| AT5G49850.1 | Thale cress | cytosol | 33.33 | 28.36 |
| AT3G16460.1 | Thale cress | cytosol | 38.07 | 27.38 |
| AT1G52040.1 | Thale cress | cytosol | 24.65 | 27.06 |
| AT1G33790.2 | Thale cress | cytosol | 38.07 | 25.91 |
| AT1G52130.1 | Thale cress | cytosol | 23.67 | 24.84 |
| AT5G38540.1 | Thale cress | cytosol | 21.89 | 23.72 |
| AT1G73040.1 | Thale cress | cytosol | 8.09 | 23.3 |
| AT1G52000.2 | Thale cress | cytosol | 31.36 | 21.78 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 25.64 | 21.63 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 6.31 | 21.48 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:818518 | UniProt:A0A1P8AXC4 | ProteinID:AAC28977.1 | ProteinID:AEC09662.1 |
| ProteinID:ANM61320.1 | ProteinID:ANM61321.1 | ArrayExpress:AT2G39330 | EnsemblPlantsGene:AT2G39330 | RefSeq:AT2G39330 | TAIR:AT2G39330 |
| RefSeq:AT2G39330-TAIR-G | EnsemblPlants:AT2G39330.2 | EMBL:AY062098 | EMBL:AY087871 | EMBL:AY124879 | Unigene:At.22280 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0009506 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | Symbol:JAL23 |
| InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001318382.1 | RefSeq:NP_001323546.1 | RefSeq:NP_181465.1 |
| PFAM:PF01419 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI000848A200 | SEG:seg | : | : | : | : |
Description
JAL23jacalin-related lectin 23 [Source:TAIR;Acc:AT2G39330]
Coordinates
chr2:-:16419494..16421858
Molecular Weight (calculated)
56346.4 Da
IEP (calculated)
8.549
GRAVY (calculated)
-0.368
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MQFNRLVYHQ SQIRDPGLVN IIKLEYTLYL DLDNLVKKFI LQYLKKYKMA KIYRKLTGYG GEGGREWDDD VYEGVRKVYV GQDINRITYV KFEYVKEDGQ
101: VVTTEYGKII QQPKEFVLQY PDEHIIAVEG NYRGVALCAT EVITNLVFKT SKGRKSPLFG PNLLGITTGT KFVIEDGGKK IVGFHGRSGN ALDALGVYFV
201: HGSLTTSPPV YKLDAQGGTD GRVWDDGSYD GVKSLRIGQD NSRITYLEFE YEKGGKLETC RHGVKQERSL KFELNPDEYI KSVEATYDKP DIFRNVVITS
301: LTFETSKGRT SFSGYKGGKK FKLEQKGRRL VGFHGKEGSA IDALGAYFAP IPTPTPIIPA KKLPAIGGSG GVAWDDGVYD GVRKILVGQG NDGVAFVKFE
401: YNKGKDLVSG DDHGKMTLLG TEEFVLEDGE YLTAIDGYYD KIFGVETPMI ICLQFKTNKR ESTPFGMDSG EKFSLGEKGH KIVGFHGQAS DVVHSIGVTV
501: VPITNTK
101: VVTTEYGKII QQPKEFVLQY PDEHIIAVEG NYRGVALCAT EVITNLVFKT SKGRKSPLFG PNLLGITTGT KFVIEDGGKK IVGFHGRSGN ALDALGVYFV
201: HGSLTTSPPV YKLDAQGGTD GRVWDDGSYD GVKSLRIGQD NSRITYLEFE YEKGGKLETC RHGVKQERSL KFELNPDEYI KSVEATYDKP DIFRNVVITS
301: LTFETSKGRT SFSGYKGGKK FKLEQKGRRL VGFHGKEGSA IDALGAYFAP IPTPTPIIPA KKLPAIGGSG GVAWDDGVYD GVRKILVGQG NDGVAFVKFE
401: YNKGKDLVSG DDHGKMTLLG TEEFVLEDGE YLTAIDGYYD KIFGVETPMI ICLQFKTNKR ESTPFGMDSG EKFSLGEKGH KIVGFHGQAS DVVHSIGVTV
501: VPITNTK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.