Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90860 | Canola | cytosol | 37.85 | 73.06 |
| AT5G28520.1 | Thale cress | cytosol | 38.66 | 63.58 |
| AT2G25980.1 | Thale cress | cytosol | 34.77 | 57.68 |
| AT3G16430.2 | Thale cress | cytosol | 22.82 | 57.43 |
| AT3G16420.1 | Thale cress | cytosol | 22.82 | 57.05 |
| AT1G52100.1 | Thale cress | cytosol | 31.41 | 53.55 |
| AT5G35940.1 | Thale cress | cytosol | 31.54 | 52.93 |
| AT1G61230.1 | Thale cress | cytosol | 35.44 | 52.28 |
| AT5G35950.1 | Thale cress | cytosol | 30.87 | 51.8 |
| AT1G60095.1 | Thale cress | cytosol | 41.07 | 50.92 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 15.03 | 50.68 |
| AT1G57570.1 | Thale cress | mitochondrion | 41.34 | 50.16 |
| AT3G16450.2 | Thale cress | cytosol | 20.0 | 49.67 |
| AT1G60130.1 | Thale cress | cytosol | 40.0 | 49.67 |
| AT5G38550.1 | Thale cress | cytosol | 39.33 | 49.33 |
| AT1G60110.2 | Thale cress | cytosol | 41.07 | 49.2 |
| AT1G52060.1 | Thale cress | extracellular | 20.67 | 49.04 |
| AT5G38540.1 | Thale cress | cytosol | 30.2 | 48.08 |
| AT1G52070.1 | Thale cress | extracellular | 20.27 | 47.94 |
| AT1G52050.1 | Thale cress | extracellular | 19.87 | 47.28 |
| AT5G49850.1 | Thale cress | cytosol | 37.45 | 46.81 |
| AT3G16440.2 | Thale cress | cytosol | 20.13 | 46.44 |
| AT5G49870.1 | Thale cress | cytosol | 37.18 | 46.09 |
| AT1G52130.1 | Thale cress | cytosol | 28.86 | 44.51 |
| AT2G39310.4 | Thale cress | cytosol | 26.04 | 42.36 |
| AT1G52110.1 | Thale cress | mitochondrion | 34.9 | 42.28 |
| AT3G16470.1 | Thale cress | cytosol | 24.3 | 40.13 |
| AT3G21380.1 | Thale cress | cytosol | 23.76 | 38.48 |
| AT1G52120.2 | Thale cress | cytosol | 23.62 | 38.34 |
| AT2G39330.2 | Thale cress | cytosol | 25.91 | 38.07 |
| AT3G16460.1 | Thale cress | cytosol | 34.23 | 36.17 |
| AT5G46000.1 | Thale cress | cytosol | 16.91 | 31.82 |
| AT1G52030.2 | Thale cress | cytosol | 23.76 | 27.57 |
| AT1G52040.1 | Thale cress | cytosol | 15.84 | 25.54 |
| AT1G73040.1 | Thale cress | cytosol | 5.91 | 25.0 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 17.85 | 22.13 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 4.16 | 20.81 |
| AT1G52000.2 | Thale cress | cytosol | 18.79 | 19.18 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:840271 | ProteinID:AAF97293.1 | ProteinID:AEE31624.1 | ProteinID:AEE31625.1 |
| ArrayExpress:AT1G33790 | EnsemblPlantsGene:AT1G33790 | RefSeq:AT1G33790 | TAIR:AT1G33790 | RefSeq:AT1G33790-TAIR-G | EnsemblPlants:AT1G33790.2 |
| TAIR:AT1G33790.2 | EMBL:AY054174 | Unigene:At.26396 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001154390.2 |
| RefSeq:NP_564427.1 | PFAM:PF01419 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009046 | PO:PO:0020100 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | UniProt:Q9LQ31 |
| SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI00000A8F9E | SEG:seg | : | : |
Description
JAL4Jacalin-related lectin 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ31]
Coordinates
chr1:+:12256664..12260615
Molecular Weight (calculated)
81847.3 Da
IEP (calculated)
6.626
GRAVY (calculated)
-0.435
Length
745 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKLEAKGG KGGNQWDDLL DHDNIAKIHV QGGHEGIQYV KFDYVKFDNL KIGQPKLGSI HGLSRKGFTQ TFEIDPTSEY IVSVEGYYDE SKGIIQALKF
101: KTNKKTSDMI GYDENGLKFS LEVKGKAIIG FHGFADTNLN SLGAYFAPAP PTKFDYQGGS GAQLWDDGSN YNGVRKVSFS LDDTEIRQIR IEYDKSGLVE
201: KREYGSNVGR QEEFVLDYPT EYIIYMEGTC DIVSDTSKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSPLILSAP
301: APPPPPAEKL QAKGGNGGNQ WDDLADHDHV TKIYVQGGQE GIQYVKFDYV KNGQPQSGSV HGLLGRGFTQ TFEIDPTNEH LVSVEGYYDE SKGLVQGLKF
401: KTNKKTSDMI GYDENGLKFS LEVNGKKIIG FHGYAQTYLN SLGAYFVTAP PTKFDYQGGS GAQLWDDGTN YNGVRKISFA LDANEIRQIR IDYDKGGLIE
501: RREYGGNVGR QEEFVVDYPS EYIIYMEGTC DIVSDASKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSRFILPPS
601: AETLQAKGGE GGDPWSDGVF NGVRNIYVGQ GENGVSAVKF VYDKDSQVAE GNDHGKPTLL GYEEFKLEYP SEYITTVEGC FDKIFGSGGG VITMLKFKTN
701: KRTSPPFGLE TTSNFVLGKE GYKIVGFHGT SSHELHQLGV YVMPI
101: KTNKKTSDMI GYDENGLKFS LEVKGKAIIG FHGFADTNLN SLGAYFAPAP PTKFDYQGGS GAQLWDDGSN YNGVRKVSFS LDDTEIRQIR IEYDKSGLVE
201: KREYGSNVGR QEEFVLDYPT EYIIYMEGTC DIVSDTSKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSPLILSAP
301: APPPPPAEKL QAKGGNGGNQ WDDLADHDHV TKIYVQGGQE GIQYVKFDYV KNGQPQSGSV HGLLGRGFTQ TFEIDPTNEH LVSVEGYYDE SKGLVQGLKF
401: KTNKKTSDMI GYDENGLKFS LEVNGKKIIG FHGYAQTYLN SLGAYFVTAP PTKFDYQGGS GAQLWDDGTN YNGVRKISFA LDANEIRQIR IDYDKGGLIE
501: RREYGGNVGR QEEFVVDYPS EYIIYMEGTC DIVSDASKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSRFILPPS
601: AETLQAKGGE GGDPWSDGVF NGVRNIYVGQ GENGVSAVKF VYDKDSQVAE GNDHGKPTLL GYEEFKLEYP SEYITTVEGC FDKIFGSGGG VITMLKFKTN
701: KRTSPPFGLE TTSNFVLGKE GYKIVGFHGT SSHELHQLGV YVMPI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.