Factsheet for AT1G61230.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G57570.1	Thale cress	mitochondrion	67.72	55.7
AT5G49860.1	Thale cress	cytosol, plastid	22.18	50.68
AT2G25980.1	Thale cress	cytosol	44.16	49.67
AT3G16430.2	Thale cress	cytosol	28.12	47.97
AT1G52100.1	Thale cress	cytosol	40.4	46.68
AT1G60095.1	Thale cress	cytosol	55.25	46.42
AT3G16420.1	Thale cress	cytosol	27.33	46.31
AT5G35940.1	Thale cress	cytosol	40.59	46.17
AT1G60130.1	Thale cress	cytosol	54.06	45.5
AT1G60110.2	Thale cress	cytosol	56.04	45.5
AT5G28520.1	Thale cress	cytosol	40.59	45.25
AT5G49850.1	Thale cress	cytosol	53.27	45.13
AT3G16450.2	Thale cress	cytosol	26.53	44.67
AT5G49870.1	Thale cress	cytosol	52.87	44.43
AT1G52110.1	Thale cress	mitochondrion	53.66	44.06
AT5G35950.1	Thale cress	cytosol	38.42	43.69
AT5G38550.1	Thale cress	cytosol	51.09	43.43
AT3G16440.2	Thale cress	cytosol	27.72	43.34
AT1G52060.1	Thale cress	extracellular	26.93	43.31
AT1G52070.1	Thale cress	extracellular	26.53	42.54
AT1G52050.1	Thale cress	extracellular	25.74	41.53
AT5G38540.1	Thale cress	cytosol	37.43	40.38
AT2G39310.4	Thale cress	cytosol	35.05	38.65
AT1G52130.1	Thale cress	cytosol	36.24	37.89
AT3G21380.1	Thale cress	cytosol	33.27	36.52
AT3G16470.1	Thale cress	cytosol	32.28	36.14
AT1G33790.2	Thale cress	cytosol	52.28	35.44
AT2G39330.2	Thale cress	cytosol	35.45	35.31
AT1G52120.2	Thale cress	cytosol	31.68	34.86
AT3G16460.1	Thale cress	cytosol	40.79	29.22
AT5G46000.1	Thale cress	cytosol	22.38	28.54
AT1G52030.2	Thale cress	cytosol	31.68	24.92
AT1G52040.1	Thale cress	cytosol	20.2	22.08
AT1G73040.1	Thale cress	cytosol	7.13	20.45
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	23.17	19.47
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	5.15	17.45
AT1G52000.2	Thale cress	cytosol	23.96	16.58

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	EntrezGene:3767595	ProteinID:AEE33806.1	ArrayExpress:AT1G61230	EnsemblPlantsGene:AT1G61230
RefSeq:AT1G61230	TAIR:AT1G61230	RefSeq:AT1G61230-TAIR-G	EnsemblPlants:AT1G61230.1	TAIR:AT1G61230.1	Unigene:At.74432
UniProt:F4HTI1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0030246	InterPro:IPR001229
InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	RefSeq:NP_176318.3	PFAM:PF01419
PFscan:PS51752	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0001A7B22B
SEG:seg	:	:	:	:	:

Description

Mannose-binding lectin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTI1]

Coordinates

chr1:+:22578951..22580781

Molecular Weight (calculated)

56231.9 Da

IEP (calculated)

7.255

GRAVY (calculated)

-0.250

Length

505 amino acids

Sequence
(BLAST)

001: MQIEIDHLNN EHLESVESYY DDAPCYIQAL QFKTNFKVSE LIGYGKGTKF SLSVKGKIII GFHGYIKSQN NPLVKSLGAY FTWIPDCRLE AKGSKGGIQW
101: DDGADHEGIT KIHVRGGFEG IQYIKFDYVK SGQPKIGSVH GLSEGYYDDE STAIQALQFK TNIKTSELLG YEKGKKFSLA DKGKKIIGFH GYAEKNLISL
201: GAYFTTVSVT KSVCHGSKII ESWDDGVFDG IRKVYVSYSI NHVACITFEY ISNHSVVKRQ HGNNTSLVEE FELNYPNEFI TSVDGTFKNS GMRKVMCVTS
301: LVFKTSKGRI SPTYGSVTGT KFVLETKDCA LAGFHGWTFL GFLTAIGAYF SLLPCPPNAE KLEARGYDRG AFWDDGVYDG VRKIYVGQCE NGIAFLKFVY
401: DKDTRMVIGD DHGNKTPLEV KELDLEYPGE YVTAVEGCYN KGIEGDVESI TMLKFKTNKR TSISFGFESS SSFLLEKEGF KIVGFHGKAS NMIHQLGVHV
501: IPITH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.