Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G52060.1 | Thale cress | extracellular | 72.2 | 71.97 |
| AT1G52070.1 | Thale cress | extracellular | 70.61 | 70.16 |
| AT3G16430.2 | Thale cress | cytosol | 40.89 | 43.24 |
| AT3G16420.1 | Thale cress | cytosol | 39.94 | 41.95 |
| AT2G25980.1 | Thale cress | cytosol | 46.65 | 32.52 |
| AT5G35950.1 | Thale cress | cytosol | 44.73 | 31.53 |
| AT5G28520.1 | Thale cress | cytosol | 45.05 | 31.13 |
| AT5G35940.1 | Thale cress | cytosol | 44.09 | 31.08 |
| AT3G16450.2 | Thale cress | cytosol | 29.71 | 31.0 |
| AT1G52100.1 | Thale cress | cytosol | 40.26 | 28.83 |
| AT3G16440.2 | Thale cress | cytosol | 29.71 | 28.79 |
| AT1G52120.2 | Thale cress | cytosol | 40.26 | 27.45 |
| AT1G61230.1 | Thale cress | cytosol | 41.53 | 25.74 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 17.89 | 25.34 |
| AT3G16470.1 | Thale cress | cytosol | 36.42 | 25.28 |
| AT1G57570.1 | Thale cress | mitochondrion | 47.28 | 24.1 |
| AT1G60095.1 | Thale cress | cytosol | 45.69 | 23.79 |
| AT1G60130.1 | Thale cress | cytosol | 45.37 | 23.67 |
| AT2G39310.4 | Thale cress | cytosol | 34.5 | 23.58 |
| AT5G49850.1 | Thale cress | cytosol | 44.09 | 23.15 |
| AT1G60110.2 | Thale cress | cytosol | 45.37 | 22.83 |
| AT5G49870.1 | Thale cress | cytosol | 43.45 | 22.63 |
| AT1G52110.1 | Thale cress | mitochondrion | 41.85 | 21.3 |
| AT2G39330.2 | Thale cress | cytosol | 34.19 | 21.1 |
| AT5G46000.1 | Thale cress | cytosol | 26.52 | 20.96 |
| AT5G38550.1 | Thale cress | cytosol | 39.3 | 20.71 |
| AT1G33790.2 | Thale cress | cytosol | 47.28 | 19.87 |
| AT3G21380.1 | Thale cress | cytosol | 28.75 | 19.57 |
| AT3G16460.1 | Thale cress | cytosol | 42.49 | 18.87 |
| AT1G73040.1 | Thale cress | cytosol | 9.9 | 17.61 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 8.31 | 17.45 |
| AT5G38540.1 | Thale cress | cytosol | 25.88 | 17.31 |
| AT1G52130.1 | Thale cress | cytosol | 26.52 | 17.18 |
| AT1G52030.2 | Thale cress | cytosol | 32.27 | 15.73 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 28.43 | 14.81 |
| AT1G52040.1 | Thale cress | cytosol | 18.53 | 12.55 |
| AT1G52000.2 | Thale cress | cytosol | 28.11 | 12.05 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:841634 | ProteinID:AAD12679.1 | ProteinID:AEE32750.1 | ArrayExpress:AT1G52050 |
| EnsemblPlantsGene:AT1G52050 | RefSeq:AT1G52050 | TAIR:AT1G52050 | RefSeq:AT1G52050-TAIR-G | EnsemblPlants:AT1G52050.1 | TAIR:AT1G52050.1 |
| UniProt:F4IB94 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 |
| InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_175617.2 | PFAM:PF01419 | PO:PO:0001078 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009010 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009047 |
| PO:PO:0020100 | PO:PO:0025281 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | SMART:SM00915 |
| SUPFAM:SSF51101 | SignalP:SignalP-noTM | UniParc:UPI0000197073 | : | : | : |
Description
JAL8Jacalin-related lectin 8 [Source:UniProtKB/Swiss-Prot;Acc:F4IB94]
Coordinates
chr1:-:19354919..19356901
Molecular Weight (calculated)
34647.7 Da
IEP (calculated)
5.859
GRAVY (calculated)
-0.267
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MFIIYLFIFL SSAIIDSNGV AMAQKIEAIG GKGGKRWDDG ANDNVAKVYI RGDHEGIQYI KFDYVKDGQS FNGSVHGVSA DGFTQTFEID HLQYEQIVSV
101: EGYYDWKTGV MQALQFKTNL KTSEFIGYQK GTKFSLGVDG KVIVGFHGSA WRSLRSLGAY VKTAPTKSEL QGGITGGEYW DDGPNFDGVR KVYVTFTETH
201: IRSMNIDYDQ DGQVVTRYHG MKNGETQEFA VDFPNEYMTS VEGTYDHISE GNYLVLTSLT FKTSKGRISQ TFGLVIGTKF VLETKGNVIS GFHGRDGGSF
301: DAIGVYFSPM ISS
101: EGYYDWKTGV MQALQFKTNL KTSEFIGYQK GTKFSLGVDG KVIVGFHGSA WRSLRSLGAY VKTAPTKSEL QGGITGGEYW DDGPNFDGVR KVYVTFTETH
201: IRSMNIDYDQ DGQVVTRYHG MKNGETQEFA VDFPNEYMTS VEGTYDHISE GNYLVLTSLT FKTSKGRISQ TFGLVIGTKF VLETKGNVIS GFHGRDGGSF
301: DAIGVYFSPM ISS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.