Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G49860.1 | Thale cress | cytosol, plastid | 29.36 | 79.19 |
| AT5G49870.1 | Thale cress | cytosol | 76.85 | 76.21 |
| AT1G52110.1 | Thale cress | mitochondrion | 66.44 | 64.39 |
| CDY69096 | Canola | cytosol | 55.37 | 56.41 |
| CDY60590 | Canola | cytosol | 55.03 | 56.07 |
| Bra018945.1-P | Field mustard | cytosol | 48.49 | 54.84 |
| AT1G60095.1 | Thale cress | cytosol | 54.19 | 53.74 |
| AT1G61230.1 | Thale cress | cytosol | 45.13 | 53.27 |
| AT1G60130.1 | Thale cress | cytosol | 53.02 | 52.67 |
| CDY34134 | Canola | cytosol | 18.12 | 51.92 |
| AT2G25980.1 | Thale cress | cytosol | 39.09 | 51.89 |
| AT1G60110.2 | Thale cress | cytosol | 53.19 | 50.96 |
| AT5G35940.1 | Thale cress | cytosol | 36.91 | 49.55 |
| AT5G38540.1 | Thale cress | cytosol | 38.59 | 49.15 |
| AT5G38550.1 | Thale cress | cytosol | 48.49 | 48.65 |
| AT1G57570.1 | Thale cress | mitochondrion | 50.0 | 48.53 |
| AT5G35950.1 | Thale cress | cytosol | 36.07 | 48.42 |
| CDY47824 | Canola | cytosol | 28.36 | 47.34 |
| AT1G52130.1 | Thale cress | cytosol | 38.26 | 47.2 |
| AT1G52100.1 | Thale cress | cytosol | 34.56 | 47.14 |
| AT3G16430.2 | Thale cress | cytosol | 23.15 | 46.62 |
| AT3G16420.1 | Thale cress | cytosol | 22.65 | 45.3 |
| AT1G52050.1 | Thale cress | extracellular | 23.15 | 44.09 |
| AT5G28520.1 | Thale cress | cytosol | 33.05 | 43.49 |
| AT3G16450.2 | Thale cress | cytosol | 21.81 | 43.33 |
| AT1G52060.1 | Thale cress | extracellular | 22.82 | 43.31 |
| AT1G52070.1 | Thale cress | extracellular | 22.65 | 42.86 |
| AT3G16440.2 | Thale cress | cytosol | 22.82 | 42.11 |
| AT2G39310.4 | Thale cress | cytosol | 29.19 | 37.99 |
| AT1G33790.2 | Thale cress | cytosol | 46.81 | 37.45 |
| AT3G16470.1 | Thale cress | cytosol | 27.52 | 36.36 |
| AT1G52120.2 | Thale cress | cytosol | 27.18 | 35.29 |
| AT3G21380.1 | Thale cress | cytosol | 26.17 | 33.91 |
| AT2G39330.2 | Thale cress | cytosol | 28.36 | 33.33 |
| AT5G46000.1 | Thale cress | cytosol | 18.79 | 28.28 |
| AT3G16460.1 | Thale cress | cytosol | 33.39 | 28.23 |
| AT1G52030.2 | Thale cress | cytosol | 27.01 | 25.08 |
| AT1G73040.1 | Thale cress | cytosol | 7.38 | 25.0 |
| AT1G52040.1 | Thale cress | cytosol | 15.94 | 20.56 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 20.47 | 20.3 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 4.87 | 19.46 |
| AT1G52000.2 | Thale cress | cytosol | 20.13 | 16.44 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:835048 | ProteinID:AED95864.1 | EMBL:AK227703 | ArrayExpress:AT5G49850 |
| EnsemblPlantsGene:AT5G49850 | RefSeq:AT5G49850 | TAIR:AT5G49850 | RefSeq:AT5G49850-TAIR-G | EnsemblPlants:AT5G49850.1 | TAIR:AT5G49850.1 |
| ProteinID:BAA98152.1 | EMBL:BT003160 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 |
| InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_199796.1 | PFAM:PF01419 |
| PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | UniProt:Q9LTA8 | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI000000BF1D | : | : | : | : | : |
Description
JAL46Jacalin-related lectin 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA8]
Coordinates
chr5:-:20259440..20262585
Molecular Weight (calculated)
66834.1 Da
IEP (calculated)
7.089
GRAVY (calculated)
-0.400
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MTERSEALGK DGNRRWDDKS DHDDVTKIYV NYSLMGIESI RFDYVKSGKP IEGPFRGETY NTYTHTFEIN HLKNEHLESV EGSYTQRGIQ TLQFKTNLRI
101: SEPIGYPGKD GIKFILAVEG KKIIGFHGST YFRLYSLGAY FTRVTPTRIE AIGGKVGTKW DDGVDQAGFT KIHVRSGQEG IQFIKFEYVD KNGRLRDGSI
201: HGSIYRRGSP HVFEIRHVDK EYLVSVEGYY DGDGDCAVIQ ALRFRTNVKT SQLMGPKTGK KFRLAASGMK IVGFHGYAEK NLTSLGGYFT PIIPTKSECQ
301: GVTERSTLWD SGAFEGIRKV SVTWRSYCIR CFRINYENDG KVVKRAHGMN DDSRITDEFV VDYPYEVITS IVGTMNDSYV TSFVFKTSKG RTSRTFGERT
401: SDSVEFVIES KGCAVVGFHG WYAPLGAGYI TALGAHFYPM PLPPAAEKLE AQGGAGGVPW DDGSNFERVR KIYIGTCEVG IVSVRFLYEN DIEEIVVGDH
501: HGNKNLLRHE EFDLDNACEY LTSVEGSYDV IPGSEDVEVI LMLKFTTNKR TSPCYGLDDD PTFVLHKAGH RIIGFHGKSS NMLHKLGIHV LPITDP
101: SEPIGYPGKD GIKFILAVEG KKIIGFHGST YFRLYSLGAY FTRVTPTRIE AIGGKVGTKW DDGVDQAGFT KIHVRSGQEG IQFIKFEYVD KNGRLRDGSI
201: HGSIYRRGSP HVFEIRHVDK EYLVSVEGYY DGDGDCAVIQ ALRFRTNVKT SQLMGPKTGK KFRLAASGMK IVGFHGYAEK NLTSLGGYFT PIIPTKSECQ
301: GVTERSTLWD SGAFEGIRKV SVTWRSYCIR CFRINYENDG KVVKRAHGMN DDSRITDEFV VDYPYEVITS IVGTMNDSYV TSFVFKTSKG RTSRTFGERT
401: SDSVEFVIES KGCAVVGFHG WYAPLGAGYI TALGAHFYPM PLPPAAEKLE AQGGAGGVPW DDGSNFERVR KIYIGTCEVG IVSVRFLYEN DIEEIVVGDH
501: HGNKNLLRHE EFDLDNACEY LTSVEGSYDV IPGSEDVEVI LMLKFTTNKR TSPCYGLDDD PTFVLHKAGH RIIGFHGKSS NMLHKLGIHV LPITDP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.