Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59556 | Canola | cytosol | 85.0 | 87.47 |
| CDY45301 | Canola | cytosol | 55.22 | 86.69 |
| CDY53520 | Canola | cytosol | 55.22 | 86.69 |
| Bra026177.1-P | Field mustard | cytosol | 55.0 | 86.35 |
| Bra023885.1-P | Field mustard | nucleus | 86.52 | 73.7 |
| AT3G16450.2 | Thale cress | cytosol | 31.96 | 49.0 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 23.04 | 47.96 |
| AT3G16440.2 | Thale cress | cytosol | 31.09 | 44.27 |
| AT3G16420.1 | Thale cress | cytosol | 28.04 | 43.29 |
| AT3G16470.1 | Thale cress | cytosol | 41.52 | 42.35 |
| AT3G16430.2 | Thale cress | cytosol | 27.17 | 42.23 |
| AT1G52100.1 | Thale cress | cytosol | 37.83 | 39.82 |
| AT2G39310.4 | Thale cress | cytosol | 39.57 | 39.74 |
| AT2G25980.1 | Thale cress | cytosol | 38.04 | 38.98 |
| AT2G39330.2 | Thale cress | cytosol | 41.52 | 37.67 |
| AT5G35940.1 | Thale cress | cytosol | 36.09 | 37.39 |
| AT5G28520.1 | Thale cress | cytosol | 36.09 | 36.64 |
| AT5G35950.1 | Thale cress | cytosol | 34.35 | 35.59 |
| AT1G61230.1 | Thale cress | cytosol | 36.52 | 33.27 |
| AT1G52120.2 | Thale cress | cytosol | 32.61 | 32.68 |
| AT1G52060.1 | Thale cress | extracellular | 20.43 | 29.94 |
| AT5G46000.1 | Thale cress | cytosol | 25.43 | 29.55 |
| AT1G60095.1 | Thale cress | cytosol | 37.61 | 28.79 |
| AT1G52050.1 | Thale cress | extracellular | 19.57 | 28.75 |
| AT5G38550.1 | Thale cress | cytosol | 36.96 | 28.62 |
| AT1G52070.1 | Thale cress | extracellular | 19.57 | 28.57 |
| AT1G52030.2 | Thale cress | cytosol | 39.78 | 28.5 |
| AT1G57570.1 | Thale cress | mitochondrion | 38.04 | 28.5 |
| AT1G60130.1 | Thale cress | cytosol | 35.87 | 27.5 |
| AT1G60110.2 | Thale cress | cytosol | 36.96 | 27.33 |
| AT1G52040.1 | Thale cress | cytosol | 27.39 | 27.27 |
| AT3G16460.1 | Thale cress | cytosol | 41.52 | 27.09 |
| AT5G49870.1 | Thale cress | cytosol | 35.0 | 26.79 |
| AT1G52000.2 | Thale cress | cytosol | 41.96 | 26.44 |
| AT1G52110.1 | Thale cress | mitochondrion | 35.0 | 26.18 |
| AT5G49850.1 | Thale cress | cytosol | 33.91 | 26.17 |
| AT1G33790.2 | Thale cress | cytosol | 38.48 | 23.76 |
| AT5G38540.1 | Thale cress | cytosol | 23.26 | 22.86 |
| AT1G73040.1 | Thale cress | cytosol | 8.48 | 22.16 |
| AT1G52130.1 | Thale cress | cytosol | 21.74 | 20.7 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 6.3 | 19.46 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 24.57 | 18.8 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:821692 | ProteinID:AEE76503.1 | EMBL:AK221897 | EMBL:AK229853 |
| ArrayExpress:AT3G21380 | EnsemblPlantsGene:AT3G21380 | RefSeq:AT3G21380 | TAIR:AT3G21380 | RefSeq:AT3G21380-TAIR-G | EnsemblPlants:AT3G21380.1 |
| TAIR:AT3G21380.1 | Unigene:At.38069 | ProteinID:BAB03051.1 | EMBL:BT010454 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| RefSeq:NP_001319607.1 | PFAM:PF01419 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | UniProt:Q9LIF8 |
| SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI00000AAD1B | SEG:seg | : | : |
Description
JAL36Jacalin-related lectin 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIF8]
Coordinates
chr3:+:7528181..7530686
Molecular Weight (calculated)
49726.8 Da
IEP (calculated)
6.469
GRAVY (calculated)
-0.638
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATMSWDD GKHMKVKRVQ ITYEDVINSI EAEYDGDTHN PHHHGTPGKK SDGVSLSPDE YITDVTGYYK TTGAEDAIAA LAFKTNKTEY GPYGNKTRNQ
101: FSIHAPKDNQ IAGFQGISSN VLNSIDVHFA PLPSSSSSSS SLSQANKVDA QGGKGGTSWD DGAHDHVRRV YIGQGDSGVT YVKFEYEKDD KKESREHGKK
201: TLLGAEVFEV DPDDYITSVE VQSDRIFGQD TEVITSLIFK TSKGKFSPPF GLEGSQKYEL KDKNGGKLVG FHGRVGGELL NALGAYFAPS SGRGTPSATQ
301: PPGSAQPTGS AGAKKLEAKG GNVGNPWDDG PHEGVRKVYI GQGDSGVSYV KFVYDKDSKE VPGNDHGKRT LLAPEEFLLE YPNEYITSVE LNYDKIFGTE
401: GEIITMLRFT TNKRTSPPFG LEGAKSVLLK EDGHKIVGFH GKAGADIIHQ VGVHVKPISK
101: FSIHAPKDNQ IAGFQGISSN VLNSIDVHFA PLPSSSSSSS SLSQANKVDA QGGKGGTSWD DGAHDHVRRV YIGQGDSGVT YVKFEYEKDD KKESREHGKK
201: TLLGAEVFEV DPDDYITSVE VQSDRIFGQD TEVITSLIFK TSKGKFSPPF GLEGSQKYEL KDKNGGKLVG FHGRVGGELL NALGAYFAPS SGRGTPSATQ
301: PPGSAQPTGS AGAKKLEAKG GNVGNPWDDG PHEGVRKVYI GQGDSGVSYV KFVYDKDSKE VPGNDHGKRT LLAPEEFLLE YPNEYITSVE LNYDKIFGTE
401: GEIITMLRFT TNKRTSPPFG LEGAKSVLLK EDGHKIVGFH GKAGADIIHQ VGVHVKPISK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.