Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 6
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G52060.1 | Thale cress | extracellular | 81.59 | 81.85 |
| AT1G52050.1 | Thale cress | extracellular | 70.16 | 70.61 |
| AT3G16430.2 | Thale cress | cytosol | 41.27 | 43.92 |
| AT3G16420.1 | Thale cress | cytosol | 39.37 | 41.61 |
| AT2G25980.1 | Thale cress | cytosol | 48.25 | 33.85 |
| AT5G28520.1 | Thale cress | cytosol | 45.08 | 31.35 |
| AT3G16450.2 | Thale cress | cytosol | 29.52 | 31.0 |
| AT5G35950.1 | Thale cress | cytosol | 42.86 | 30.41 |
| AT5G35940.1 | Thale cress | cytosol | 42.54 | 30.18 |
| AT1G52100.1 | Thale cress | cytosol | 40.0 | 28.83 |
| AT1G52120.2 | Thale cress | cytosol | 41.9 | 28.76 |
| AT3G16440.2 | Thale cress | cytosol | 28.89 | 28.17 |
| AT1G61230.1 | Thale cress | cytosol | 42.54 | 26.53 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 18.41 | 26.24 |
| AT3G16470.1 | Thale cress | cytosol | 36.83 | 25.72 |
| AT1G60095.1 | Thale cress | cytosol | 46.35 | 24.29 |
| AT1G60130.1 | Thale cress | cytosol | 46.03 | 24.17 |
| AT1G57570.1 | Thale cress | mitochondrion | 46.35 | 23.78 |
| AT1G60110.2 | Thale cress | cytosol | 46.67 | 23.63 |
| AT2G39310.4 | Thale cress | cytosol | 34.29 | 23.58 |
| AT5G49850.1 | Thale cress | cytosol | 42.86 | 22.65 |
| AT5G49870.1 | Thale cress | cytosol | 42.22 | 22.13 |
| AT5G38550.1 | Thale cress | cytosol | 41.27 | 21.89 |
| AT1G52110.1 | Thale cress | mitochondrion | 42.22 | 21.63 |
| AT2G39330.2 | Thale cress | cytosol | 32.7 | 20.32 |
| AT1G33790.2 | Thale cress | cytosol | 47.94 | 20.27 |
| AT3G21380.1 | Thale cress | cytosol | 28.57 | 19.57 |
| AT5G46000.1 | Thale cress | cytosol | 24.44 | 19.44 |
| AT5G38540.1 | Thale cress | cytosol | 28.57 | 19.23 |
| AT3G16460.1 | Thale cress | cytosol | 42.22 | 18.87 |
| AT1G73040.1 | Thale cress | cytosol | 10.16 | 18.18 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 8.57 | 18.12 |
| AT1G52130.1 | Thale cress | cytosol | 26.98 | 17.6 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 29.84 | 15.64 |
| AT1G52030.2 | Thale cress | cytosol | 31.75 | 15.58 |
| AT1G52000.2 | Thale cress | cytosol | 26.98 | 11.64 |
| AT1G52040.1 | Thale cress | cytosol | 16.51 | 11.26 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:841636 | ProteinID:AAD12681.1 | ProteinID:AEE32752.1 | EMBL:AK118817 |
| ArrayExpress:AT1G52070 | EnsemblPlantsGene:AT1G52070 | RefSeq:AT1G52070 | TAIR:AT1G52070 | RefSeq:AT1G52070-TAIR-G | EnsemblPlants:AT1G52070.1 |
| TAIR:AT1G52070.1 | Unigene:At.22558 | EMBL:BT005551 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001321509.1 |
| RefSeq:NP_175619.2 | PFAM:PF01419 | PO:PO:0009005 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 |
| UniProt:Q8GWI7 | SMART:SM00915 | SUPFAM:SSF51101 | SignalP:SignalP-noTM | UniParc:UPI000000C6A3 | : |
Description
JAL10Jacalin-related lectin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWI7]
Coordinates
chr1:-:19364809..19366925
Molecular Weight (calculated)
34047.3 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.132
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIIYIFLFL SSAIIDSTGL AKAQKLDAIG GKGGKQWDDG ADHDNVAKVY IRGGLEGIQY IKFDYVKDGK TIDASIHGVS GSGFTQTFEI DYQNSEYIVS
101: VDGYYDKSGT MQALEFKTNL KTSEVIGYPK GTTKFSLGGV NGKMVIGFHG SAGKVLNSIG AYLTTAPPTK SQLVGGLTGG EPWDDGSNYD GVKKISVTYI
201: STLIRSINVD YEKDGQVVTR YHGMKNGDTE EFVIDYPNEY LISVEGTYNI LPDDNVLVIR SLIFKTSKGR ISPTYGFVSG TKFVLESQGN AIVGFYGRDG
301: GAFDAIGVYF SPIPS
101: VDGYYDKSGT MQALEFKTNL KTSEVIGYPK GTTKFSLGGV NGKMVIGFHG SAGKVLNSIG AYLTTAPPTK SQLVGGLTGG EPWDDGSNYD GVKKISVTYI
201: STLIRSINVD YEKDGQVVTR YHGMKNGDTE EFVIDYPNEY LISVEGTYNI LPDDNVLVIR SLIFKTSKGR ISPTYGFVSG TKFVLESQGN AIVGFYGRDG
301: GAFDAIGVYF SPIPS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.