Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G16440.2 | Thale cress | cytosol | 81.67 | 75.85 |
| CDY28360 | Canola | cytosol | 31.67 | 55.88 |
| AT3G16430.2 | Thale cress | cytosol | 50.67 | 51.35 |
| AT3G16420.1 | Thale cress | cytosol | 50.33 | 50.67 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 34.67 | 47.06 |
| AT2G25980.1 | Thale cress | cytosol | 52.0 | 34.74 |
| AT5G35940.1 | Thale cress | cytosol | 51.33 | 34.68 |
| AT1G52100.1 | Thale cress | cytosol | 49.0 | 33.64 |
| AT5G35950.1 | Thale cress | cytosol | 49.33 | 33.33 |
| AT3G21380.1 | Thale cress | cytosol | 49.0 | 31.96 |
| AT1G52060.1 | Thale cress | extracellular | 33.0 | 31.53 |
| AT2G39310.4 | Thale cress | cytosol | 48.0 | 31.44 |
| AT3G16470.1 | Thale cress | cytosol | 47.0 | 31.26 |
| AT5G28520.1 | Thale cress | cytosol | 47.0 | 31.13 |
| AT1G52050.1 | Thale cress | extracellular | 31.0 | 29.71 |
| AT1G52070.1 | Thale cress | extracellular | 31.0 | 29.52 |
| AT2G39330.2 | Thale cress | cytosol | 49.0 | 28.99 |
| AT5G46000.1 | Thale cress | cytosol | 36.0 | 27.27 |
| AT1G61230.1 | Thale cress | cytosol | 44.67 | 26.53 |
| AT1G73040.1 | Thale cress | cytosol | 14.0 | 23.86 |
| AT1G52120.2 | Thale cress | cytosol | 35.33 | 23.09 |
| AT3G16460.1 | Thale cress | cytosol | 53.67 | 22.84 |
| AT1G57570.1 | Thale cress | mitochondrion | 46.33 | 22.64 |
| AT1G60130.1 | Thale cress | cytosol | 44.33 | 22.17 |
| AT1G60095.1 | Thale cress | cytosol | 44.33 | 22.13 |
| AT5G49870.1 | Thale cress | cytosol | 44.0 | 21.96 |
| AT5G49850.1 | Thale cress | cytosol | 43.33 | 21.81 |
| AT5G38550.1 | Thale cress | cytosol | 43.0 | 21.72 |
| AT1G60110.2 | Thale cress | cytosol | 45.0 | 21.7 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 10.67 | 21.48 |
| AT1G52030.2 | Thale cress | cytosol | 45.67 | 21.34 |
| AT1G52110.1 | Thale cress | mitochondrion | 42.67 | 20.81 |
| AT1G52040.1 | Thale cress | cytosol | 31.67 | 20.56 |
| AT1G33790.2 | Thale cress | cytosol | 49.67 | 20.0 |
| AT1G52000.2 | Thale cress | cytosol | 37.33 | 15.34 |
| AT5G38540.1 | Thale cress | cytosol | 23.33 | 14.96 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 29.67 | 14.81 |
| AT1G52130.1 | Thale cress | cytosol | 19.67 | 12.22 |
Protein Annotations
| Gene3D:2.100.10.30 | PDB:2JZ4 | MapMan:35.1 | EntrezGene:820893 | ProteinID:AAB63632.1 | ProteinID:AEE75817.1 |
| ProteinID:AEE75818.1 | ProteinID:AEE75819.1 | EMBL:AF380655 | EMBL:AK317360 | ArrayExpress:AT3G16450 | EnsemblPlantsGene:AT3G16450 |
| RefSeq:AT3G16450 | TAIR:AT3G16450 | RefSeq:AT3G16450-TAIR-G | EnsemblPlants:AT3G16450.2 | TAIR:AT3G16450.2 | EMBL:AY133546 |
| Unigene:At.48133 | ProteinID:BAB01144.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009409 | GO:GO:0009506 |
| GO:GO:0009628 | GO:GO:0010043 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom |
| InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001030711.1 | RefSeq:NP_188266.1 | RefSeq:NP_850596.1 | UniProt:O04311 |
| PFAM:PF01419 | PO:PO:0000037 | PO:PO:0007115 | PO:PO:0007131 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009025 | PO:PO:0020030 | PO:PO:0020100 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 |
| SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI00000A3B7E | SEG:seg | : | : |
Description
JAL33Jacalin-related lectin 33 [Source:UniProtKB/Swiss-Prot;Acc:O04311]
Coordinates
chr3:+:5588292..5590085
Molecular Weight (calculated)
32024.4 Da
IEP (calculated)
4.863
GRAVY (calculated)
-0.319
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKVEAGGG AGGASWDDGV HDGVRKVHVG QGQDGVSSIN VVYAKDSQDV EGGEHGKKTL LGFETFEVDA DDYIVAVQVT YDNVFGQDSD IITSITFNTF
101: KGKTSPPYGL ETQKKFVLKD KNGGKLVGFH GRAGEALYAL GAYFATTTTP VTPAKKLSAI GGDEGTAWDD GAYDGVKKVY VGQGQDGISA VKFEYNKGAE
201: NIVGGEHGKP TLLGFEEFEI DYPSEYITAV EGTYDKIFGS DGLIITMLRF KTNKQTSAPF GLEAGTAFEL KEEGHKIVGF HGKASELLHQ FGVHVMPLTN
101: KGKTSPPYGL ETQKKFVLKD KNGGKLVGFH GRAGEALYAL GAYFATTTTP VTPAKKLSAI GGDEGTAWDD GAYDGVKKVY VGQGQDGISA VKFEYNKGAE
201: NIVGGEHGKP TLLGFEEFEI DYPSEYITAV EGTYDKIFGS DGLIITMLRF KTNKQTSAPF GLEAGTAFEL KEEGHKIVGF HGKASELLHQ FGVHVMPLTN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.