Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G52040.1 | Thale cress | cytosol | 33.42 | 52.81 |
| AT3G21380.1 | Thale cress | cytosol | 26.44 | 41.96 |
| AT3G16450.2 | Thale cress | cytosol | 15.34 | 37.33 |
| CDX77840 | Canola | cytosol | 4.66 | 35.79 |
| AT1G52120.2 | Thale cress | cytosol | 21.51 | 34.2 |
| AT3G16440.2 | Thale cress | cytosol | 15.07 | 34.06 |
| AT3G16470.1 | Thale cress | cytosol | 20.96 | 33.92 |
| AT1G52030.2 | Thale cress | cytosol | 29.04 | 33.02 |
| AT2G39310.4 | Thale cress | cytosol | 20.68 | 32.97 |
| AT3G16420.1 | Thale cress | cytosol | 13.42 | 32.89 |
| AT2G25980.1 | Thale cress | cytosol | 19.86 | 32.29 |
| AT1G52100.1 | Thale cress | cytosol | 19.32 | 32.27 |
| AT5G35950.1 | Thale cress | cytosol | 19.59 | 32.21 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 9.73 | 32.13 |
| AT5G35940.1 | Thale cress | cytosol | 19.45 | 31.98 |
| AT3G16430.2 | Thale cress | cytosol | 12.88 | 31.76 |
| AT2G39330.2 | Thale cress | cytosol | 21.78 | 31.36 |
| AT5G28520.1 | Thale cress | cytosol | 18.36 | 29.58 |
| AT1G52050.1 | Thale cress | extracellular | 12.05 | 28.11 |
| AT1G52060.1 | Thale cress | extracellular | 11.92 | 27.71 |
| AT1G52070.1 | Thale cress | extracellular | 11.64 | 26.98 |
| AT1G61230.1 | Thale cress | cytosol | 16.58 | 23.96 |
| AT5G46000.1 | Thale cress | cytosol | 12.33 | 22.73 |
| AT1G60130.1 | Thale cress | cytosol | 18.08 | 22.0 |
| AT1G60095.1 | Thale cress | cytosol | 18.08 | 21.96 |
| AT5G38550.1 | Thale cress | cytosol | 17.81 | 21.89 |
| AT5G49870.1 | Thale cress | cytosol | 17.81 | 21.63 |
| AT1G73040.1 | Thale cress | cytosol | 5.21 | 21.59 |
| AT1G57570.1 | Thale cress | mitochondrion | 17.95 | 21.34 |
| AT1G60110.2 | Thale cress | cytosol | 17.53 | 20.58 |
| AT1G52110.1 | Thale cress | mitochondrion | 17.26 | 20.49 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 16.85 | 20.47 |
| AT3G16460.1 | Thale cress | cytosol | 19.45 | 20.14 |
| AT5G49850.1 | Thale cress | cytosol | 16.44 | 20.13 |
| AT5G38540.1 | Thale cress | cytosol | 12.6 | 19.66 |
| AT1G33790.2 | Thale cress | cytosol | 19.18 | 18.79 |
| AT1G52130.1 | Thale cress | cytosol | 11.51 | 17.39 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 3.01 | 14.77 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:841629 | ProteinID:AAD12691.1 | ProteinID:AEE32746.1 | EMBL:AK226551 |
| ProteinID:ANM57711.1 | ArrayExpress:AT1G52000 | EnsemblPlantsGene:AT1G52000 | RefSeq:AT1G52000 | TAIR:AT1G52000 | RefSeq:AT1G52000-TAIR-G |
| EnsemblPlants:AT1G52000.2 | Unigene:At.37684 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 |
| InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001320196.1 | RefSeq:NP_175612.1 |
| PFAM:PF01419 | PFscan:PS51752 | UniProt:Q9ZU23 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI000009C5C8 |
| SEG:seg | : | : | : | : | : |
Description
JAL5Jacalin-related lectin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU23]
Coordinates
chr1:-:19333157..19336072
Molecular Weight (calculated)
73943.0 Da
IEP (calculated)
4.788
GRAVY (calculated)
-0.736
Length
730 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWDDGKHTK VKRVQLTFDD VIRSIEVEYD GTSLKSQPRG TAGTKIDGFT LSSDEYITEV NGYYKTTFSG EVITSLTFKT NKRTYGTYGN KTSSYFSVAA
101: PKDNQIVGFL GSSSHALNSI DAHFAPAPPP GSTGAKPGAS GIGSDSGSIG SAGTNPGADG TRETEKNAGG SKPSSGSAGT NPGASAVGNG ETEKNAGGSK
201: PSSGSAGTNP GASAGGNGET EKNVGGSKPS SGKAGTNPGA NAGGNGGTEK NAGGSKSSSG SARTNPGASA GGNGETVSNI GDTESNAGGS KSNDGANNGA
301: SGIESNAGST GTNFGAGGTG GIGDTESDAG GSKTNSGNGG TNDGASGIGS NDGSTGTNPG AGGGTDSNIE GTENNVGGKE TNPGASGIGN SDGSTGTSPE
401: GTESNADGTK TNTGGKESNT GSESNTNSSP QKLEAQGGNG GNQWDDGTDH DGVMKIHVAV GGLGIEQIRF DYVKNGQLKE GPFHGVKGRG GTSTIEISHP
501: DEYLVSVEGL YDSSNIIQGI QFQSNKHTSQ YFGYEYYGDG TQFSLQVNEK KIIGFHGFAD SHLNSLGAYF VPISSSSSSL TPPPNKVKAQ GGSYGETFDD
601: GAFDHVRKVY VGQGDSGVAY VKFDYEKDGK KETQEHGKMT LSGTEEFEVD SDDYITSMEV YVDKVYGYKS EIVIALTFKT FKGETSPRFG IETENKYEVK
701: DGKGGKLAGF HGKASDVLYA IGAYFIPAAN
101: PKDNQIVGFL GSSSHALNSI DAHFAPAPPP GSTGAKPGAS GIGSDSGSIG SAGTNPGADG TRETEKNAGG SKPSSGSAGT NPGASAVGNG ETEKNAGGSK
201: PSSGSAGTNP GASAGGNGET EKNVGGSKPS SGKAGTNPGA NAGGNGGTEK NAGGSKSSSG SARTNPGASA GGNGETVSNI GDTESNAGGS KSNDGANNGA
301: SGIESNAGST GTNFGAGGTG GIGDTESDAG GSKTNSGNGG TNDGASGIGS NDGSTGTNPG AGGGTDSNIE GTENNVGGKE TNPGASGIGN SDGSTGTSPE
401: GTESNADGTK TNTGGKESNT GSESNTNSSP QKLEAQGGNG GNQWDDGTDH DGVMKIHVAV GGLGIEQIRF DYVKNGQLKE GPFHGVKGRG GTSTIEISHP
501: DEYLVSVEGL YDSSNIIQGI QFQSNKHTSQ YFGYEYYGDG TQFSLQVNEK KIIGFHGFAD SHLNSLGAYF VPISSSSSSL TPPPNKVKAQ GGSYGETFDD
601: GAFDHVRKVY VGQGDSGVAY VKFDYEKDGK KETQEHGKMT LSGTEEFEVD SDDYITSMEV YVDKVYGYKS EIVIALTFKT FKGETSPRFG IETENKYEVK
701: DGKGGKLAGF HGKASDVLYA IGAYFIPAAN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.