Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28362 | Canola | cytosol, nucleus, plastid | 41.05 | 17.97 |
| CDX82402 | Canola | cytosol, plasma membrane | 45.26 | 14.48 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 31.58 | 14.35 |
| CDX90860 | Canola | cytosol | 50.53 | 12.44 |
| CDX82401 | Canola | cytosol | 32.63 | 11.65 |
| CDY20197 | Canola | cytosol | 25.26 | 11.65 |
| CDY53520 | Canola | cytosol | 35.79 | 11.6 |
| CDY45301 | Canola | cytosol | 34.74 | 11.26 |
| CDY13177 | Canola | extracellular | 36.84 | 11.08 |
| CDY06998 | Canola | cytosol | 23.16 | 10.58 |
| CDX75882 | Canola | cytosol | 31.58 | 10.49 |
| CDX93274 | Canola | cytosol | 24.21 | 10.22 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 15.79 | 10.07 |
| CDY21999 | Canola | extracellular | 17.89 | 9.83 |
| CDY24969 | Canola | cytosol | 42.11 | 8.81 |
| CDY07657 | Canola | cytosol | 42.11 | 8.81 |
| CDY20195 | Canola | cytosol | 38.95 | 8.73 |
| AT1G52120.2 | Thale cress | cytosol | 41.05 | 8.5 |
| CDY38589 | Canola | cytosol | 40.0 | 8.3 |
| CDY02548 | Canola | cytosol | 37.89 | 8.28 |
| CDX74856 | Canola | cytosol | 40.0 | 8.26 |
| CDY59556 | Canola | cytosol | 36.84 | 7.83 |
| CDY60590 | Canola | cytosol | 46.32 | 7.52 |
| CDY69096 | Canola | cytosol | 46.32 | 7.52 |
| CDY07000 | Canola | cytosol | 34.74 | 7.47 |
| CDX93273 | Canola | cytosol | 34.74 | 7.24 |
| CDY22879 | Canola | cytosol | 30.53 | 6.7 |
| CDY06997 | Canola | cytosol | 31.58 | 6.7 |
| CDX93275 | Canola | cytosol | 31.58 | 6.7 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 25.26 | 6.65 |
| CDY43099 | Canola | cytosol | 47.37 | 6.65 |
| CDX92074 | Canola | cytosol | 45.26 | 6.62 |
| CDY43910 | Canola | cytosol | 51.58 | 6.6 |
| CDY72239 | Canola | cytosol | 21.05 | 6.43 |
| CDY45640 | Canola | cytosol | 20.0 | 6.19 |
| CDY28360 | Canola | cytosol | 10.53 | 5.88 |
| CDY63700 | Canola | cytosol | 35.79 | 5.81 |
| CDY06999 | Canola | cytosol | 18.95 | 5.66 |
| CDX79175 | Canola | cytosol | 17.89 | 5.59 |
| CDX96652 | Canola | extracellular | 35.79 | 5.53 |
| CDY47758 | Canola | cytosol | 29.47 | 5.27 |
| CDY32783 | Canola | cytosol | 28.42 | 5.16 |
| CDY40959 | Canola | cytosol | 27.37 | 5.1 |
| AT1G52040.1 | Thale cress | cytosol | 24.21 | 4.98 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 28.42 | 4.8 |
| AT1G52000.2 | Thale cress | cytosol | 35.79 | 4.66 |
| CDY70821 | Canola | cytosol | 21.05 | 4.46 |
| CDX82963 | Canola | cytosol | 18.95 | 4.3 |
| CDY70857 | Canola | cytosol | 17.89 | 4.06 |
| CDX87871 | Canola | cytosol | 38.95 | 4.03 |
| CDY54394 | Canola | cytosol | 4.21 | 4.0 |
| CDY43090 | Canola | cytosol | 11.58 | 3.97 |
| CDY46535 | Canola | cytosol | 15.79 | 3.9 |
| CDY59365 | Canola | cytosol | 32.63 | 3.88 |
| CDY53442 | Canola | cytosol | 15.79 | 3.8 |
| CDY68611 | Canola | cytosol | 10.53 | 3.77 |
| CDY22878 | Canola | cytosol | 38.95 | 3.77 |
| CDY65744 | Canola | peroxisome | 10.53 | 3.52 |
| CDY51196 | Canola | cytosol | 28.42 | 2.9 |
| CDY51197 | Canola | cytosol | 27.37 | 2.9 |
| CDY02564 | Canola | cytosol | 28.42 | 2.88 |
| CDY51195 | Canola | cytosol, extracellular | 29.47 | 2.63 |
| CDY02563 | Canola | cytosol, extracellular | 28.42 | 2.55 |
| CDY47825 | Canola | cytosol | 12.63 | 1.51 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 3.16 | 1.3 |
| CDX82115 | Canola | extracellular | 3.16 | 1.2 |
| CDY47824 | Canola | cytosol | 2.11 | 0.56 |
| CDY34134 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX77840 | EnsemblPlantsGene:GSBRNA2T00128939001 | Gene3D:2.100.10.30 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom |
| InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR45172 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDX77840 | ProteinID:CDX77840.1 |
| SUPFAM:SSF51101 | UniParc:UPI0004EE980E | MapMan:35.1 | : | : | : |
Description
BnaC03g53790D
Coordinates
chrLK031813:+:329263..329550
Molecular Weight (calculated)
10389.4 Da
IEP (calculated)
6.953
GRAVY (calculated)
-0.482
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MGFDENGTKF TLAAGGNKII GFHGSAETNK MSLGAYFTTL PPIKMEQQGG CGGHPWDHGI YTGVRKVYVT YSPSGLSHIM VEYDKMGKQE TREDL
001: MGYDDTGTKF TLEISGNKIT GFHGSADANL KSLGAYFTPP PPIKQEYQGG TGGSPWDHGI YTGIRKVYVT FSPVSISHIK VDYDKDGKVE TRQDGDMLGE
101: NRVQGQPNEF VVDYPYEYIT SIEVTCDKVS GNTNRVRSLS FKTSKDRTSP TYGRKSERTF VFESKGRALV GLHGRCCWAI DALGAHFGAP PIPPPPPTEK
201: LQGSGGDGGE SWDDGAFDGV RKIYVGQGEN GIASVKFVYD KNNQLVLGEE HGKHTLLGYE EFELDYPSEY ITAVEGYYDK VFGSESSVIV MLKFKTNKRT
301: SPPYGMDAGV SFILGKEGHK VVGFHGKASP ELYQIGVTVA PITK
101: NRVQGQPNEF VVDYPYEYIT SIEVTCDKVS GNTNRVRSLS FKTSKDRTSP TYGRKSERTF VFESKGRALV GLHGRCCWAI DALGAHFGAP PIPPPPPTEK
201: LQGSGGDGGE SWDDGAFDGV RKIYVGQGEN GIASVKFVYD KNNQLVLGEE HGKHTLLGYE EFELDYPSEY ITAVEGYYDK VFGSESSVIV MLKFKTNKRT
301: SPPYGMDAGV SFILGKEGHK VVGFHGKASP ELYQIGVTVA PITK
Arabidopsis Description
JAL20Jacalin-related lectin 20 [Source:UniProtKB/Swiss-Prot;Acc:O80998]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.