Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28362 | Canola | cytosol, nucleus, plastid | 62.94 | 82.95 |
| CDX82401 | Canola | cytosol | 75.17 | 80.83 |
| Bra001632.1-P | Field mustard | cytosol | 67.48 | 79.1 |
| CDX82402 | Canola | cytosol, plasma membrane | 66.43 | 63.97 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 28.67 | 39.23 |
| CDX77840 | Canola | cytosol | 10.49 | 31.58 |
| CDY54394 | Canola | cytosol | 10.84 | 31.0 |
| CDY13177 | Canola | extracellular | 31.82 | 28.8 |
| CDY20197 | Canola | cytosol | 20.28 | 28.16 |
| CDY53520 | Canola | cytosol | 28.67 | 27.99 |
| CDY45301 | Canola | cytosol | 28.32 | 27.65 |
| CDY28360 | Canola | cytosol | 15.38 | 25.88 |
| CDY02548 | Canola | cytosol | 38.81 | 25.52 |
| CDY43090 | Canola | cytosol | 24.13 | 24.91 |
| CDX90860 | Canola | cytosol | 32.52 | 24.09 |
| CDY07657 | Canola | cytosol | 36.01 | 22.69 |
| CDY24969 | Canola | cytosol | 35.66 | 22.47 |
| CDX74856 | Canola | cytosol | 36.01 | 22.39 |
| CDY21999 | Canola | extracellular | 12.94 | 21.39 |
| CDX92074 | Canola | cytosol | 48.6 | 21.38 |
| CDY20195 | Canola | cytosol | 31.47 | 21.23 |
| CDY06998 | Canola | cytosol | 15.38 | 21.15 |
| CDY43099 | Canola | cytosol | 48.6 | 20.53 |
| CDX93274 | Canola | cytosol | 15.73 | 20.0 |
| CDX93273 | Canola | cytosol | 31.82 | 19.96 |
| CDY07000 | Canola | cytosol | 30.77 | 19.91 |
| CDY38589 | Canola | cytosol | 31.47 | 19.65 |
| CDY06997 | Canola | cytosol | 30.77 | 19.64 |
| CDY40959 | Canola | cytosol | 34.62 | 19.41 |
| CDX93275 | Canola | cytosol | 29.72 | 18.97 |
| CDY59556 | Canola | cytosol | 29.37 | 18.79 |
| CDY69096 | Canola | cytosol | 37.76 | 18.46 |
| CDY60590 | Canola | cytosol | 37.41 | 18.29 |
| CDY22879 | Canola | cytosol | 27.27 | 18.01 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 21.68 | 17.17 |
| CDY06999 | Canola | cytosol | 18.88 | 16.98 |
| CDY43910 | Canola | cytosol | 42.66 | 16.44 |
| CDX82963 | Canola | cytosol | 23.08 | 15.75 |
| CDY70857 | Canola | cytosol | 23.08 | 15.75 |
| CDY32783 | Canola | cytosol | 26.22 | 14.34 |
| CDY47758 | Canola | cytosol | 26.57 | 14.31 |
| CDY59365 | Canola | cytosol | 39.51 | 14.16 |
| CDY47824 | Canola | cytosol | 17.48 | 14.01 |
| CDY63700 | Canola | cytosol | 26.92 | 13.16 |
| CDY65744 | Canola | peroxisome | 12.94 | 13.03 |
| CDX96652 | Canola | extracellular | 26.92 | 12.52 |
| CDX79175 | Canola | cytosol | 13.29 | 12.5 |
| CDY46535 | Canola | cytosol | 16.78 | 12.47 |
| CDY53442 | Canola | cytosol | 16.78 | 12.15 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 21.68 | 11.01 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 8.74 | 10.87 |
| CDX82115 | Canola | extracellular | 9.44 | 10.8 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 5.59 | 10.74 |
| CDY68611 | Canola | cytosol | 9.44 | 10.19 |
| CDY51196 | Canola | cytosol | 29.37 | 9.03 |
| CDY72239 | Canola | cytosol | 9.79 | 9.0 |
| CDY51197 | Canola | cytosol | 27.97 | 8.91 |
| CDY02564 | Canola | cytosol | 29.02 | 8.87 |
| CDX87871 | Canola | cytosol | 26.57 | 8.27 |
| CDY45640 | Canola | cytosol | 8.39 | 7.82 |
| CDY51195 | Canola | cytosol, extracellular | 29.02 | 7.8 |
| CDY02563 | Canola | cytosol, extracellular | 28.32 | 7.64 |
| CDY22878 | Canola | cytosol | 24.83 | 7.23 |
| CDY34134 | Canola | cytosol | 4.9 | 6.73 |
| CDY70821 | Canola | cytosol | 9.79 | 6.25 |
| CDY47825 | Canola | cytosol | 17.13 | 6.18 |
Protein Annotations
| EnsemblPlants:CDX75882 | EnsemblPlantsGene:GSBRNA2T00123873001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDX75882 | ProteinID:CDX75882.1 | SEG:seg |
| SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI0004EF1905 | MapMan:35.1 | : | : |
Description
BnaC03g39650D
Coordinates
chrLK031805:+:1499143..1500448
Molecular Weight (calculated)
31493.9 Da
IEP (calculated)
5.622
GRAVY (calculated)
-0.457
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKVEAQGG KGGNQWDDGS EHDAVIKIQV GAGGIGIQYV KFDYVKNGQT EEAPLRGIKG RSIAADPFVI SHPGEHLVSV EGWYNPEGLH QGLKFKSNKK
101: TSDLIGYDDG THFTLQVQDK KIVGFHGFAG DYVHSLGAYF SPLTSSTTLT PAKKLPALGS QGHDGVSAVK FEYVNGSQVV IGGERGKPTL LGFEEFELDY
201: PNEYITAVDG TVDKIYGSDS AVITLQENIV TDILTENEIL GIFRRISEEI PRKPKIWVSS EFPRNIPRKS YSSENTDEYP RIYYSR
101: TSDLIGYDDG THFTLQVQDK KIVGFHGFAG DYVHSLGAYF SPLTSSTTLT PAKKLPALGS QGHDGVSAVK FEYVNGSQVV IGGERGKPTL LGFEEFELDY
201: PNEYITAVDG TVDKIYGSDS AVITLQENIV TDILTENEIL GIFRRISEEI PRKPKIWVSS EFPRNIPRKS YSSENTDEYP RIYYSR
001: MAQKVEAQGG KGANLWDDGS THDAVTKIQL AAGIDGIQYV QFDYVKNGQP EQAPLRGTKG RVLPADPFVI NHPDEHLVSV EGWYSPEGII QGIKFISNKK
101: TSDVIGSDEG THFTLQVKDK KIIGFHGSAG GNLNSLGAYF APLTTTTPLT PAKQLTAFGS DDGTVWDDGA YVGVKKVYVG QAQDGISAVK FVYDKSPEEV
201: TGEEHGKSTL LGFEEFVLDY PSEYITAVDG TYDKIFGSDG SVITMLRFKT NKQTSPPFGL EAGTVFELKE EGHKIVGFHG RADVLLHKIG VHVRPLSN
101: TSDVIGSDEG THFTLQVKDK KIIGFHGSAG GNLNSLGAYF APLTTTTPLT PAKQLTAFGS DDGTVWDDGA YVGVKKVYVG QAQDGISAVK FVYDKSPEEV
201: TGEEHGKSTL LGFEEFVLDY PSEYITAVDG TYDKIFGSDG SVITMLRFKT NKQTSPPFGL EAGTVFELKE EGHKIVGFHG RADVLLHKIG VHVRPLSN
Arabidopsis Description
PBP1PYK10-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04314]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.