CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93275	Canola	cytosol	95.31	95.31
Bra017017.1-P	Field mustard	cytosol	57.81	75.73
CDY06999	Canola	cytosol	51.79	72.96
CDX93273	Canola	cytosol	70.09	68.86
CDY07000	Canola	cytosol	66.74	67.65
CDX74856	Canola	cytosol	67.19	65.43
CDY24969	Canola	cytosol	63.62	62.78
CDY07657	Canola	cytosol	63.17	62.33
CDY38589	Canola	cytosol	60.27	58.95
CDX93274	Canola	cytosol	28.79	57.33
CDY06998	Canola	cytosol	25.89	55.77
CDY44637	Canola	cytosol, mitochondrion, plastid	41.74	51.8
CDY20195	Canola	cytosol	37.5	39.62
CDY20197	Canola	cytosol	18.08	39.32
CDX82402	Canola	cytosol, plasma membrane	25.67	38.72
CDX90860	Canola	cytosol	33.26	38.6
CDY54394	Canola	cytosol	8.48	38.0
CDY28362	Canola	cytosol, nucleus, plastid	18.3	37.79
CDY02548	Canola	cytosol	36.38	37.47
CDY65744	Canola	peroxisome	23.44	36.97
CDY59556	Canola	cytosol	35.49	35.57
CDX82401	Canola	cytosol	20.98	35.34
CDY22879	Canola	cytosol	33.71	34.87
CDY46535	Canola	cytosol	29.91	34.81
CDY53442	Canola	cytosol	29.91	33.92
CDY45640	Canola	cytosol	23.21	33.88
CDY13177	Canola	extracellular	23.44	33.23
CDY53520	Canola	cytosol	21.43	32.76
CDY70857	Canola	cytosol	30.36	32.46
CDY45301	Canola	cytosol	21.21	32.42
CDX82963	Canola	cytosol	30.13	32.22
CDX77840	Canola	cytosol	6.7	31.58
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	14.73	31.58
CDY32783	Canola	cytosol	36.61	31.36
CDY47758	Canola	cytosol	36.61	30.89
CDX75882	Canola	cytosol	19.64	30.77
CDY21999	Canola	extracellular	11.83	30.64
CDY28360	Canola	cytosol	11.16	29.41
CDY72239	Canola	cytosol	19.87	28.62
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	35.94	28.6
CDY69096	Canola	cytosol	36.83	28.21
CDY60590	Canola	cytosol	36.83	28.21
CDX79175	Canola	cytosol	18.97	27.96
CDY68611	Canola	cytosol	16.52	27.92
CDY40959	Canola	cytosol	30.36	26.67
CDX92074	Canola	cytosol	35.94	24.77
CDY43099	Canola	cytosol	35.71	23.63
CDY43910	Canola	cytosol	38.39	23.18
CDY70821	Canola	cytosol	22.99	22.99
CDY63700	Canola	cytosol	25.89	19.83
CDY59365	Canola	cytosol	34.82	19.55
CDY51197	Canola	cytosol	38.84	19.38
CDY02564	Canola	cytosol	40.18	19.23
CDY51196	Canola	cytosol	39.51	19.03
CDX96652	Canola	extracellular	26.12	19.02
CDY48032	Canola	cytosol, extracellular, nucleus	9.6	18.7
CDX87871	Canola	cytosol	38.17	18.61
CDY22878	Canola	cytosol	40.4	18.43
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.03	18.12
CDY43090	Canola	cytosol	10.71	17.33
CDY51195	Canola	cytosol, extracellular	39.29	16.54
CDY02563	Canola	cytosol, extracellular	38.84	16.42
CDX82115	Canola	extracellular	9.15	16.4
CDY47825	Canola	cytosol	28.79	16.27
CDY47824	Canola	cytosol	11.61	14.57
CDY34134	Canola	cytosol	3.57	7.69

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	EnsemblPlants:CDY06997	ProteinID:CDY06997	ProteinID:CDY06997.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00123305001	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom
InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PFAM:PF01419	PFscan:PS51752	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EE1B17	:	:	:

Description

BnaA04g23180D

Coordinates

chrLK031974:-:590485..593148

Molecular Weight (calculated)

49581.7 Da

IEP (calculated)

5.390

GRAVY (calculated)

-0.346

Length

448 amino acids

Sequence
(BLAST)

001: MGRMYQKMAL CGGEGGSEWD DGVHEGVKKV YVGQDLSRIT YIKFEYVKEG GEVVTREYGT VTQDPREFVI EYPDEHITAV EGSHNKVALI ATEVITSLVF
101: KTSKGRTSPT FGPNLFGVVN GTKFKFEDEG KKIVGFHGRS DKAVDALGVY LELDSLTTPF PIYKLEAQGG KEGSVWDDGC FDGVRTVRVG QDDCRITYLE
201: FEYVKGARFE TRHHGVKGET QSEFVVNFMN EHITSMEATY DNPKFFRNTV ITSLKFETST GRTAIFGYEV GKKFVLGQNG GRLLGFHGKE GEAIDALGAY
301: FEDIPVPTPP PVIGDSWGDY GIYDGVKKIK IGLYEEGIAF VKFVYIKGNG LVTGDDHGKI TSLGAEEIVL EDGEYLTGIE GYYRPIPGAP FGKIVSIKFK
401: TNKRETPLYG LDSGEKYSFE EKGHKITGFH GRATTDVIYS IEAISRPV

Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)

001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE

Arabidopsis Description

JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.