CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32783	Canola	cytosol	95.1	96.56
CDY22879	Canola	cytosol	47.65	58.43
CDY46535	Canola	cytosol	41.05	56.62
CDY53442	Canola	cytosol	41.62	55.95
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	57.25	54.0
CDY65744	Canola	peroxisome	28.63	53.52
CDY20195	Canola	cytosol	36.72	45.99
AT1G52030.2	Thale cress	cytosol	55.18	45.64
CDX93274	Canola	cytosol	16.95	40.0
CDX74856	Canola	cytosol	34.46	39.78
CDY07657	Canola	cytosol	33.9	39.65
CDY24969	Canola	cytosol	33.71	39.43
CDX90860	Canola	cytosol	28.06	38.6
CDY51196	Canola	cytosol	66.67	38.06
CDY06998	Canola	cytosol	14.88	37.98
CDY02564	Canola	cytosol	66.29	37.61
CDY06999	Canola	cytosol	22.41	37.42
CDX93273	Canola	cytosol	32.02	37.28
CDY38589	Canola	cytosol	32.02	37.12
CDY51197	Canola	cytosol	62.34	36.86
CDY06997	Canola	cytosol	30.89	36.61
CDY07000	Canola	cytosol	30.32	36.43
CDX93275	Canola	cytosol	30.7	36.38
CDY20197	Canola	cytosol	13.94	35.92
CDY02548	Canola	cytosol	28.25	34.48
CDX82402	Canola	cytosol, plasma membrane	19.02	34.01
CDX82401	Canola	cytosol	16.95	33.83
CDY59556	Canola	cytosol	28.44	33.78
CDY44637	Canola	cytosol, mitochondrion, plastid	22.79	33.52
CDY54394	Canola	cytosol	6.21	33.0
CDY45640	Canola	cytosol	18.83	32.57
CDY28360	Canola	cytosol	10.17	31.76
CDY70857	Canola	cytosol	24.86	31.5
CDX82963	Canola	cytosol	24.86	31.5
CDY51195	Canola	cytosol, extracellular	63.09	31.48
CDY02563	Canola	cytosol, extracellular	62.71	31.42
CDY53520	Canola	cytosol	17.33	31.4
CDY45301	Canola	cytosol	17.33	31.4
CDY13177	Canola	extracellular	18.46	31.01
CDY28362	Canola	cytosol, nucleus, plastid	12.43	30.41
CDX77840	Canola	cytosol	5.27	29.47
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	11.49	29.19
CDY21999	Canola	extracellular	9.42	28.9
CDY68611	Canola	cytosol	14.31	28.68
CDY72239	Canola	cytosol	16.2	27.65
CDX79175	Canola	cytosol	15.63	27.3
CDX75882	Canola	cytosol	14.31	26.57
CDY40959	Canola	cytosol	24.67	25.69
CDY60590	Canola	cytosol	27.87	25.3
CDY69096	Canola	cytosol	27.68	25.13
CDX92074	Canola	cytosol	28.81	23.54
CDY47825	Canola	cytosol	35.03	23.46
CDY43099	Canola	cytosol	28.44	22.3
CDY70821	Canola	cytosol	18.64	22.1
CDY63700	Canola	cytosol	23.92	21.71
CDY43910	Canola	cytosol	30.13	21.56
CDY48032	Canola	cytosol, extracellular, nucleus	9.23	21.3
CDX96652	Canola	extracellular	23.92	20.65
CDX87871	Canola	cytosol	34.09	19.7
CDY22878	Canola	cytosol	35.03	18.94
CDX82115	Canola	extracellular	8.85	18.8
CDY59365	Canola	cytosol	24.48	16.29
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	4.52	16.11
CDY47824	Canola	cytosol	9.23	13.73
CDY43090	Canola	cytosol	7.16	13.72
CDY34134	Canola	cytosol	2.07	5.29

Protein Annotations

EnsemblPlants:CDY47758	EnsemblPlantsGene:GSBRNA2T00088050001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY47758	ProteinID:CDY47758.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EDD8FC	UniProt:A0A078IEY4	MapMan:35.1	:

Description

BnaCnng15490DBnaCnng15490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEY4]

Coordinates

chrLK032733:+:119250..121788

Molecular Weight (calculated)

56492.9 Da

IEP (calculated)

9.040

GRAVY (calculated)

-0.352

Length

531 amino acids

Sequence
(BLAST)

001: MEMKTQRVVM SQRVGPMGGN MGVAFDDGVF DGVKKIVVGR DQGCVSYIKI EYEKDAKFET REHGTIRGPL QEFAVEYPNE YITSVGGSFD LVPFYNAVLI
101: KSLVFYTSYR RTSPTLGVAG GRAFWLEGRT GGRLLGFHGR SGQALDSIGP YFFAPNPPLR HFERQGGNGG TPWDDGAYDG VRKILVGRGG RFVSYFRFEY
201: ARGERMVPHA HGKRQEVPQE FVVDYPHEHI ILVEGTVDVC LTSVMFKTSK GRTSRVFGNV VGRKFVFEEK DFKIVGFCGR SADAIDALGA HFGPLRTPAP
301: APSPAPGPAP APAPAPAPGP GPRPAPAPAP APAPAPGPRP APAPAPAPGQ GPRPAPGPAP GQGPHPAPAA APGTSATPAP APTTTKIGPV GGEKGNTFDD
401: GIFDGVQKIT VGKDIYSVTY IKTEYTKEGK VEISEHGTNR GELKEFSVNN PNDYITAVGG SYNHIFNYDT TLITSLYFTT SKGFTSALFG KMSGEEFNLK
501: GENGGKLLGF HGQAGHAIDA IGAHFERGSG I

Best Arabidopsis Sequence Match ( AT1G52030.1 )
(BLAST)

001: MSEKVGAMGG NKGGAFDDGV FDGVKKVIVG KDFNNVTYIK VEYEKDGKFE IREHGTNRGQ LKEFSVDYPN EYITAVGGSY DTVFGYGSAL IKSLLFKTSY
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV VTSLTFKTNK RTSQPFGMTA
601: GEHFELNEDG YKIVGFHGKA GDLVHQIGVH AVPIFTNYRC VF

Arabidopsis Description

F-ATMBPMyrosinase-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.