CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93274	Canola	cytosol	36.68	74.67
CDY06998	Canola	cytosol	33.62	74.04
CDX74856	Canola	cytosol	71.18	70.87
AT2G39310.4	Thale cress	cytosol	69.87	69.87
CDY24969	Canola	cytosol	68.34	68.94
CDY07657	Canola	cytosol	67.69	68.28
CDX93273	Canola	cytosol	64.19	64.47
CDY07000	Canola	cytosol	60.26	62.44
CDY06999	Canola	cytosol	43.23	62.26
CDY06997	Canola	cytosol	58.95	60.27
CDX93275	Canola	cytosol	58.52	59.82
CDY44637	Canola	cytosol, mitochondrion, plastid	46.07	58.45
CDY54394	Canola	cytosol	9.83	45.0
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	19.43	42.58
CDY20195	Canola	cytosol	39.08	42.22
CDX82402	Canola	cytosol, plasma membrane	26.86	41.41
CDX90860	Canola	cytosol	34.5	40.93
CDX77840	Canola	cytosol	8.3	40.0
CDY59556	Canola	cytosol	37.99	38.93
CDY20197	Canola	cytosol	17.47	38.84
CDY28362	Canola	cytosol, nucleus, plastid	18.34	38.71
CDX82401	Canola	cytosol	21.83	37.59
CDY53520	Canola	cytosol	23.8	37.2
CDY02548	Canola	cytosol	35.15	37.01
CDY45301	Canola	cytosol	23.58	36.86
CDY22879	Canola	cytosol	33.19	35.1
CDY21999	Canola	extracellular	13.1	34.68
CDX79175	Canola	cytosol	22.93	34.54
CDY65744	Canola	peroxisome	21.4	34.51
CDX82963	Canola	cytosol	30.79	33.65
CDY70857	Canola	cytosol	30.79	33.65
CDY13177	Canola	extracellular	22.93	33.23
CDY45640	Canola	cytosol	22.27	33.22
CDY68611	Canola	cytosol	19.21	33.21
CDY32783	Canola	cytosol	37.12	32.5
CDY28360	Canola	cytosol	12.01	32.35
CDY47758	Canola	cytosol	37.12	32.02
CDX75882	Canola	cytosol	19.65	31.47
CDY46535	Canola	cytosol	26.2	31.17
CDY53442	Canola	cytosol	25.98	30.13
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	35.15	28.6
CDY72239	Canola	cytosol	19.21	28.3
CDY40959	Canola	cytosol	31.44	28.24
CDY69096	Canola	cytosol	35.59	27.86
CDY60590	Canola	cytosol	35.37	27.69
CDX92074	Canola	cytosol	37.55	26.46
CDY43099	Canola	cytosol	37.55	25.41
CDY70821	Canola	cytosol	23.58	24.11
CDY43910	Canola	cytosol	38.43	23.72
CDY63700	Canola	cytosol	26.2	20.51
CDX96652	Canola	extracellular	26.42	19.67
CDY59365	Canola	cytosol	33.19	19.05
CDY51197	Canola	cytosol	36.9	18.82
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.11	18.79
CDY02564	Canola	cytosol	38.21	18.7
CDY51196	Canola	cytosol	37.12	18.28
CDY48032	Canola	cytosol, extracellular, nucleus	8.95	17.83
CDY22878	Canola	cytosol	38.21	17.82
CDX87871	Canola	cytosol	34.5	17.19
CDY02563	Canola	cytosol, extracellular	37.12	16.04
CDY51195	Canola	cytosol, extracellular	36.68	15.79
CDX82115	Canola	extracellular	8.3	15.2
CDY47825	Canola	cytosol	25.76	14.88
CDY43090	Canola	cytosol	8.73	14.44
CDY47824	Canola	cytosol	9.39	12.04
CDY34134	Canola	cytosol	2.62	5.77

Protein Annotations

EnsemblPlants:CDY38589	EnsemblPlantsGene:GSBRNA2T00066272001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY38589	ProteinID:CDY38589.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EC2B31	UniProt:A0A078HMK9	MapMan:35.1	:

Description

BnaC06g30120DBnaC06g30120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMK9]

Coordinates

chrLK032427:-:133957..136750

Molecular Weight (calculated)

51240.1 Da

IEP (calculated)

6.250

GRAVY (calculated)

-0.259

Length

458 amino acids

Sequence
(BLAST)

001: MAKMYRKLAP CGGEGGHEWD DDVYQGIRKV YVGQAFTRIT YVKFEYVKED AEVVTREYGT ISFQPEEFSL DPDEHIIEVQ GRCHRLDVKE VITALFFKTS
101: KGKMSPVFGP KKLLNGFAGT EFLFYDGGNK IVGFHGRSGN ALDALGVYFA QNCLTTPFPI YKLEARGGTK GRVWDNGYYD GVKMMRVGED NCRITYLEFE
201: YEKGKEIETH HHGVKGETPS EFVLDCPEEY IISVEATYHK PSFFRNTVIT SLKFETSKGI TSFFGYNVGT KFVLKQKNCR LVGFHGMDGD AIDALGAYFA
301: KIPTLTPLTQ SKKLSSVGGN GGVIWDDGVY DGVRTIYVGQ SNDCVSFVKF EYIKGTGLVS GEDHGKKTLL GVEELVLEDG EYITVLEGCY NKIFRVEEPV
401: IISLRFRTNK RQSVQFGMDS GEKFLLGENG YKIIGFHGQV SDVIHSVGVT IMPITTTE

Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)

001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE

Arabidopsis Description

JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.