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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54394 Canola cytosol 15.54 60.0
AT5G28520.1 Thale cress cytosol 65.03 55.41
CDX77840 Canola cytosol 12.44 50.53
CDY21999 Canola extracellular 21.24 47.4
CDX93274 Canola cytosol 27.2 46.67
CDY06998 Canola cytosol 25.13 46.63
CDX75881 Canola cytosol, extracellular, mitochondrion, plastid 24.87 45.93
CDX82401 Canola cytosol 30.05 43.61
CDX82402 Canola cytosol, plasma membrane 33.42 43.43
CDY02548 Canola cytosol 46.89 41.61
AT1G33790.2 Thale cress cytosol 73.06 37.85
CDY07657 Canola cytosol 44.3 37.67
CDY53520 Canola cytosol 28.5 37.54
CDY24969 Canola cytosol 44.04 37.44
CDY45301 Canola cytosol 28.24 37.2
CDX93273 Canola cytosol 43.78 37.06
CDX74856 Canola cytosol 43.78 36.74
CDY59556 Canola cytosol 42.23 36.47
CDY45640 Canola cytosol 28.76 36.16
CDY20195 Canola cytosol 39.64 36.08
CDY07000 Canola cytosol 40.41 35.29
CDY28362 Canola cytosol, nucleus, plastid 19.69 35.02
CDY38589 Canola cytosol 40.93 34.5
CDY44637 Canola cytosol, mitochondrion, plastid 32.12 34.35
CDY68611 Canola cytosol 23.32 33.96
CDY69096 Canola cytosol 51.3 33.85
CDY60590 Canola cytosol 51.04 33.68
CDY40959 Canola cytosol 44.04 33.33
CDY06997 Canola cytosol 38.6 33.26
CDX93275 Canola cytosol 38.6 33.26
CDY13177 Canola extracellular 27.2 33.23
CDX79175 Canola cytosol 25.91 32.89
CDY20197 Canola cytosol 17.36 32.52
CDX75882 Canola cytosol 24.09 32.52
CDY22879 Canola cytosol 35.23 31.41
CDY72239 Canola cytosol 25.13 31.19
CDY65744 Canola peroxisome 22.54 30.63
CDY06999 Canola cytosol 24.87 30.19
CDY43910 Canola cytosol 57.25 29.78
CDX82963 Canola cytosol 32.12 29.59
CDY70857 Canola cytosol 31.87 29.36
CDY32783 Canola cytosol 38.6 28.49
CDY47758 Canola cytosol 38.6 28.06
CDX92074 Canola cytosol 47.15 28.0
CDY02565 Canola cytoskeleton, cytosol, plasma membrane 39.12 26.82
CDY28360 Canola cytosol 11.66 26.47
CDY43099 Canola cytosol 46.11 26.29
CDY46535 Canola cytosol 25.39 25.45
CDY53442 Canola cytosol 25.65 25.06
CDY70821 Canola cytosol 28.5 24.55
GSMUA_Achr10P... Banana cytosol, nucleus, plastid 8.55 22.15
CDY63700 Canola cytosol 30.31 20.0
CDX96652 Canola extracellular 30.57 19.19
CDY59365 Canola cytosol 37.82 18.3
CDY51197 Canola cytosol 39.38 16.93
CDY51196 Canola cytosol 40.67 16.88
CDY02564 Canola cytosol 40.93 16.88
CDX87871 Canola cytosol 37.82 15.89
CDY22878 Canola cytosol 39.9 15.68
CDY51195 Canola cytosol, extracellular 40.93 14.85
CDY02563 Canola cytosol, extracellular 40.41 14.72
CDY47825 Canola cytosol 24.35 11.85
CDY43090 Canola cytosol 8.29 11.55
CDY47824 Canola cytosol 9.33 10.08
CDY48032 Canola cytosol, extracellular, nucleus 5.96 10.0
CDX82115 Canola extracellular 6.22 9.6
CDY34134 Canola cytosol 0.26 0.48
Protein Annotations
EnsemblPlants:CDX90860EnsemblPlantsGene:GSBRNA2T00151578001Gene3D:2.100.10.30GO:GO:0003674GO:GO:0005488GO:GO:0030246
InterPro:IPR001229InterPro:IPR036404InterPro:Jacalin-like_lectin_domInterPro:Jacalin-like_lectin_dom_plantInterPro:Jacalin-like_lectin_dom_sfPANTHER:PTHR23244
PANTHER:PTHR23244:SF208PFAM:PF01419PFscan:PS51752ProteinID:CDX90860ProteinID:CDX90860.1SEG:seg
SMART:SM00915SUPFAM:SSF51101UniParc:UPI0004EEB10BMapMan:35.1::
Description
BnaA03g25400D
Coordinates
chrLK031864:-:905070..908397
Molecular Weight (calculated)
42369.9 Da
IEP (calculated)
6.381
GRAVY (calculated)
-0.444
Length
386 amino acids
Sequence
(BLAST)
001: MLGLSNYFEI DPNNEHLVSV EGYYDEATGV IQALKFKTNK KTSEMMGYDD KGTKFSLEVN GKKIIGFHGY AETNLNSLGA YFTTVPPTKL GYQGGSGGSP
101: WDDGPNFNGV RKVSVSFDND KIRQIRIDYD KGGLVERRAH GEDVGSHGEF VVDFPNEYII SVEGTCDNVS NTTLDRVRSL VIKTSKNRTS PLFGNVSARK
201: FVLESNGYPL IGFHGRAASA LDAIGAYFSP LIPSPPPPPT EKLQAKGGEG GDPWDDGVFN GVREIHVGQG HSGIVAVKFV YEKDSQVAEG NEHGIPTMLD
301: YEKFKLDYPS EYITSVEGCF DKILNSERGI ITMLKFKTNK QTSRPYGMES TSSFVLGKEG YKIVGFHGKT SHELHQLGVH VVPITQ
Best Arabidopsis Sequence Match ( AT1G33790.2 )
(BLAST)
001: MAQKLEAKGG KGGNQWDDLL DHDNIAKIHV QGGHEGIQYV KFDYVKFDNL KIGQPKLGSI HGLSRKGFTQ TFEIDPTSEY IVSVEGYYDE SKGIIQALKF
101: KTNKKTSDMI GYDENGLKFS LEVKGKAIIG FHGFADTNLN SLGAYFAPAP PTKFDYQGGS GAQLWDDGSN YNGVRKVSFS LDDTEIRQIR IEYDKSGLVE
201: KREYGSNVGR QEEFVLDYPT EYIIYMEGTC DIVSDTSKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSPLILSAP
301: APPPPPAEKL QAKGGNGGNQ WDDLADHDHV TKIYVQGGQE GIQYVKFDYV KNGQPQSGSV HGLLGRGFTQ TFEIDPTNEH LVSVEGYYDE SKGLVQGLKF
401: KTNKKTSDMI GYDENGLKFS LEVNGKKIIG FHGYAQTYLN SLGAYFVTAP PTKFDYQGGS GAQLWDDGTN YNGVRKISFA LDANEIRQIR IDYDKGGLIE
501: RREYGGNVGR QEEFVVDYPS EYIIYMEGTC DIVSDASKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSRFILPPS
601: AETLQAKGGE GGDPWSDGVF NGVRNIYVGQ GENGVSAVKF VYDKDSQVAE GNDHGKPTLL GYEEFKLEYP SEYITTVEGC FDKIFGSGGG VITMLKFKTN
701: KRTSPPFGLE TTSNFVLGKE GYKIVGFHGT SSHELHQLGV YVMPI
Arabidopsis Description
JAL4Jacalin-related lectin 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ31]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.