CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G35940.1	Thale cress	cytosol	61.61	60.36
AT5G35950.1	Thale cress	cytosol	59.31	58.11
CDY54394	Canola	cytosol	12.87	56.0
CDX90860	Canola	cytosol	41.61	46.89
CDX82402	Canola	cytosol, plasma membrane	30.8	45.12
CDX82401	Canola	cytosol	27.36	44.74
CDY28362	Canola	cytosol, nucleus, plastid	22.3	44.7
CDY43910	Canola	cytosol	67.13	39.35
CDX75882	Canola	cytosol	25.52	38.81
CDX74856	Canola	cytosol	40.92	38.7
CDY20197	Canola	cytosol	18.16	38.35
CDY13177	Canola	extracellular	27.59	37.97
CDX77840	Canola	cytosol	8.28	37.89
CDX93274	Canola	cytosol	19.54	37.78
CDX93273	Canola	cytosol	39.54	37.72
CDY07657	Canola	cytosol	38.85	37.22
CDY24969	Canola	cytosol	38.62	37.0
CDY07000	Canola	cytosol	37.47	36.88
CDY06999	Canola	cytosol	26.9	36.79
CDY06997	Canola	cytosol	37.47	36.38
CDY06998	Canola	cytosol	17.24	36.06
CDY28360	Canola	cytosol	14.02	35.88
CDY20195	Canola	cytosol	34.94	35.85
CDY59556	Canola	cytosol	36.78	35.79
CDY40959	Canola	cytosol	41.84	35.69
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	17.01	35.41
CDX93275	Canola	cytosol	36.32	35.27
CDY38589	Canola	cytosol	37.01	35.15
CDY65744	Canola	peroxisome	22.76	34.86
CDY22879	Canola	cytosol	34.02	34.18
CDY69096	Canola	cytosol	45.29	33.68
CDY60590	Canola	cytosol	45.06	33.5
CDY21999	Canola	extracellular	13.1	32.95
CDY53520	Canola	cytosol	22.07	32.76
CDY45301	Canola	cytosol	21.84	32.42
CDY44637	Canola	cytosol, mitochondrion, plastid	26.9	32.41
CDY32783	Canola	cytosol	34.25	28.49
CDY47758	Canola	cytosol	34.48	28.25
CDY70857	Canola	cytosol	27.13	28.16
CDX82963	Canola	cytosol	26.67	27.68
CDX92074	Canola	cytosol	40.92	27.38
CDX79175	Canola	cytosol	19.08	27.3
CDY68611	Canola	cytosol	16.55	27.17
CDY53442	Canola	cytosol	24.6	27.09
CDY46535	Canola	cytosol	23.68	26.75
CDY45640	Canola	cytosol	18.62	26.38
CDY43099	Canola	cytosol	39.08	25.11
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	31.72	24.51
CDY72239	Canola	cytosol	16.32	22.83
CDY43090	Canola	cytosol	14.48	22.74
CDY48032	Canola	cytosol, extracellular, nucleus	11.72	22.17
CDX82115	Canola	extracellular	11.72	20.4
CDY63700	Canola	cytosol	27.36	20.34
CDX96652	Canola	extracellular	27.36	19.35
CDY47824	Canola	cytosol	15.63	19.05
CDY59365	Canola	cytosol	32.87	17.92
CDY70821	Canola	cytosol	17.93	17.41
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	5.75	16.78
CDY51197	Canola	cytosol	34.25	16.59
CDY02564	Canola	cytosol	35.63	16.56
CDY51196	Canola	cytosol	35.17	16.45
CDY02563	Canola	cytosol, extracellular	36.55	15.0
CDY51195	Canola	cytosol, extracellular	35.86	14.66
CDX87871	Canola	cytosol	29.66	14.04
CDY47825	Canola	cytosol	24.83	13.62
CDY22878	Canola	cytosol	30.34	13.44
CDY34134	Canola	cytosol	2.99	6.25

Protein Annotations

EnsemblPlants:CDY02548	EnsemblPlantsGene:GSBRNA2T00114229001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	ncoils:Coil
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY02548	ProteinID:CDY02548.1
SEG:seg	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EE0EBC	MapMan:35.1	:

Description

BnaA08g01550D

Coordinates

chrLK031935:+:1024018..1027636

Molecular Weight (calculated)

48236.0 Da

IEP (calculated)

7.805

GRAVY (calculated)

-0.455

Length

435 amino acids

Sequence
(BLAST)

001: MALKVEAKGV TGGNAWDDGL NHHDVTKIHV RGGLEGIQFI KFEYVKDGKI TVGPTHGIPD RGFTQTFELN HLEKEYLISV EGYYNKLTGV IQSFKFKTNK
101: RTSGLIGFNK GTKFSLEARG KRIVGFHGSA EKNLISLGAY FIKSPSIKSG IQGGQTSGKS YDDGGDYDSI RKVYVTFDGS AIRHIKFDYE KADQMETRER
201: GVKDGTQYEF MVNHPYEYIT SVEGSYDVIQ PYNCIVLTSL TFKTSKQRTS PTIGKVVGTK FVLECKGNGI SGFHGRVGFC VEGIGAYYSP FPPCPCHSEN
301: LQGNERGVFV DDHLFENAKK VCVGQDDVGI ASLKFEYANG TRTWMEGNGN KTLISYSEFE LDYPSEYITS IEGCHDKGDG AETGVITMLR INTNKRTSPQ
401: FGHESACSFV LKKEGNRMTG LYGKFSSWIQ QIGVE

Best Arabidopsis Sequence Match ( AT1G52100.1 )
(BLAST)

001: MALKVEAKGG KVGIQWDDGS DYHDVTKIYV RGGLEGIQFI KFEYVKAGKK VIGPIHGASG RGFTETFEIN NLEKEYLLSI EGYYNASTGV IQCLQFITNK
101: KTYDPIGYNE GARFTLSASR SKIIGFHGFA DKYLNSLGAY FIKIPSIQSA IEGAKTTGKG FDDGGDYDGI RKVYVTTDGS AIRHVRFDYD KAGQVETRER
201: GAKTGTQHEF TVNHPYEYIT SVEGTYAHTQ PYNCVVLTSL TFKTSKGRAS PAIGKVTGSK FKLERQGDAI VGFHGRVGSC IDGIGVYYAP LPPSPPPPEK
301: LQGQGGDGGD SWDDGAFKNV KKIYVGQGDV GIAAVKFEYE TYTSEVILAE RHGKETLLGY EDEYITAVEG CHDKVIGSET GVITMLRFKT NKRNSPPFGL
401: ESAFSFILEK DGHKIVGFHG KASTLLHQIG VHVTAIA

Arabidopsis Description

Mannose-binding lectin superfamily protein [Source:TAIR;Acc:AT1G52100]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.