CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07657	Canola	cytosol	96.48	96.48
Bra000129.1-P	Field mustard	cytosol	96.26	96.26
CDX74856	Canola	cytosol	84.14	83.04
CDX93274	Canola	cytosol	39.21	79.11
CDY06998	Canola	cytosol	35.68	77.88
AT2G39310.4	Thale cress	cytosol	75.33	74.67
CDX93273	Canola	cytosol	72.91	72.59
CDY06999	Canola	cytosol	50.22	71.7
CDY07000	Canola	cytosol	68.94	70.81
CDY38589	Canola	cytosol	68.94	68.34
CDY44637	Canola	cytosol, mitochondrion, plastid	54.19	68.14
CDY06997	Canola	cytosol	62.78	63.62
CDX93275	Canola	cytosol	62.11	62.95
CDY20197	Canola	cytosol	20.93	46.12
CDX82402	Canola	cytosol, plasma membrane	29.74	45.45
CDY54394	Canola	cytosol	9.91	45.0
CDX90860	Canola	cytosol	37.44	44.04
CDY28362	Canola	cytosol, nucleus, plastid	20.93	43.78
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	20.04	43.54
CDY20195	Canola	cytosol	40.53	43.4
CDX82401	Canola	cytosol	25.33	43.23
CDX77840	Canola	cytosol	8.81	42.11
CDY59556	Canola	cytosol	39.21	39.82
CDY02548	Canola	cytosol	37.0	38.62
CDY53520	Canola	cytosol	24.45	37.88
CDY22879	Canola	cytosol	36.12	37.88
CDY45301	Canola	cytosol	24.23	37.54
CDY65744	Canola	peroxisome	23.35	37.32
CDY21999	Canola	extracellular	14.1	36.99
CDY28360	Canola	cytosol	13.44	35.88
CDX75882	Canola	cytosol	22.47	35.66
CDY70857	Canola	cytosol	32.38	35.08
CDX82963	Canola	cytosol	31.94	34.61
CDY32783	Canola	cytosol	39.43	34.23
CDY45640	Canola	cytosol	23.13	34.2
CDY13177	Canola	extracellular	23.79	34.18
CDY47758	Canola	cytosol	39.43	33.71
CDX79175	Canola	cytosol	22.03	32.89
CDY46535	Canola	cytosol	27.75	32.73
CDY53442	Canola	cytosol	28.19	32.41
CDY68611	Canola	cytosol	18.28	31.32
CDY72239	Canola	cytosol	21.15	30.87
CDY69096	Canola	cytosol	38.99	30.26
CDY60590	Canola	cytosol	38.77	30.09
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	37.22	30.02
CDX92074	Canola	cytosol	42.29	29.54
CDY40959	Canola	cytosol	31.94	28.43
CDY43099	Canola	cytosol	41.63	27.92
CDY43910	Canola	cytosol	41.63	25.47
CDY70821	Canola	cytosol	23.57	23.88
CDY63700	Canola	cytosol	27.31	21.2
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.83	20.81
CDY59365	Canola	cytosol	35.9	20.43
CDX96652	Canola	extracellular	27.53	20.33
CDY51197	Canola	cytosol	39.87	20.16
CDY51196	Canola	cytosol	41.19	20.11
CDY02564	Canola	cytosol	41.41	20.09
CDX87871	Canola	cytosol	40.31	19.91
CDY22878	Canola	cytosol	40.97	18.94
CDY48032	Canola	cytosol, extracellular, nucleus	9.03	17.83
CDY51195	Canola	cytosol, extracellular	40.75	17.39
CDY02563	Canola	cytosol, extracellular	40.53	17.36
CDY43090	Canola	cytosol	10.13	16.61
CDY47825	Canola	cytosol	27.97	16.02
CDX82115	Canola	extracellular	8.81	16.0
CDY47824	Canola	cytosol	11.45	14.57
CDY34134	Canola	cytosol	2.86	6.25

Protein Annotations

EnsemblPlants:CDY24969	EnsemblPlantsGene:GSBRNA2T00028767001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	ncoils:Coil
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY24969	ProteinID:CDY24969.1
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EBD8C4	UniProt:A0A078GI46	MapMan:35.1	:

Description

BnaC03g22030DBnaC03g22030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GI46]

Coordinates

chrLK032166:+:544692..547487

Molecular Weight (calculated)

49500.7 Da

IEP (calculated)

6.037

GRAVY (calculated)

-0.268

Length

454 amino acids

Sequence
(BLAST)

001: MATVYRKLAI CGGEGGSEWD DDVYEGVRKV YVGQDLTRIT YIKFDYVKVD GQVVTREYGT KDQNPKEFIV AQHPDEQIIA VEGSYNKVGL LGTDVITSLV
101: FKTSKGRKSP TFGPNLLGLV NGTKFEFEDP GKKIVGFHGR AGDALDAIGV YFVINSLPPS LSPIYKLDAQ GGTEGRVWND GSFDAVKRLR IGQDEHRITY
201: LEFEYAKGGK SEKLHHGVKG GTPSEFVLDF PDEYIKSVEA TYDKPNLFKN TVITSVTIKT SKGRTSSFGY TKGKKFVLEQ KDCPLVGFHG KAGEAIDALG
301: AYFAPLIPVK KLPSVGGNGG VAWDDGVYDG VRKIYVGQGN DGVSFVKFEY IKGTNLVSGD EHGKATILGA EEFVLEDGEY LTALVGYYDK IYGVDEPAII
401: SLQFKTNKRE SIQFGMDAGE KFTLGESGHK IVGFHGQASD VIHSVGVTIV PITE

Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)

001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE

Arabidopsis Description

JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.