Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G52100.1 | CDY40314 | AT5G01210.1 | 21798944 |
| AT1G52100.1 | CDY48117 | AT5G01210.1 | 21798944 |
| AT1G52100.1 | CDY55902 | AT5G01210.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030443.1-P | Field mustard | cytosol | 99.87 | 99.87 |
| CDY54394 | Canola | cytosol | 12.53 | 93.0 |
| AT1G52100.1 | Thale cress | cytosol | 41.91 | 71.17 |
| CDY02548 | Canola | cytosol | 39.35 | 67.13 |
| CDX90860 | Canola | cytosol | 29.78 | 57.25 |
| CDY40959 | Canola | cytosol | 37.47 | 54.51 |
| CDX82402 | Canola | cytosol, plasma membrane | 21.7 | 54.21 |
| CDY69096 | Canola | cytosol | 41.11 | 52.14 |
| CDY60590 | Canola | cytosol | 40.97 | 51.97 |
| CDX77840 | Canola | cytosol | 6.6 | 51.58 |
| CDX82401 | Canola | cytosol | 18.33 | 51.13 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 14.82 | 50.69 |
| CDY06998 | Canola | cytosol | 13.21 | 47.12 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 13.21 | 46.89 |
| CDX93274 | Canola | cytosol | 14.15 | 46.67 |
| CDY34134 | Canola | cytosol | 13.07 | 46.63 |
| CDY21999 | Canola | extracellular | 10.51 | 45.09 |
| CDY13177 | Canola | extracellular | 19.0 | 44.62 |
| CDX75882 | Canola | cytosol | 16.44 | 42.66 |
| CDX74856 | Canola | cytosol | 26.28 | 42.39 |
| CDY07657 | Canola | cytosol | 25.88 | 42.29 |
| CDY47824 | Canola | cytosol | 20.08 | 41.74 |
| CDY24969 | Canola | cytosol | 25.47 | 41.63 |
| CDX93273 | Canola | cytosol | 25.2 | 41.01 |
| CDY20195 | Canola | cytosol | 23.32 | 40.8 |
| CDY20197 | Canola | cytosol | 11.32 | 40.78 |
| CDY53520 | Canola | cytosol | 16.04 | 40.61 |
| CDY45301 | Canola | cytosol | 15.9 | 40.27 |
| CDX92074 | Canola | cytosol | 35.04 | 40.0 |
| CDY07000 | Canola | cytosol | 23.58 | 39.59 |
| CDY59556 | Canola | cytosol | 23.45 | 38.93 |
| CDY38589 | Canola | cytosol | 23.72 | 38.43 |
| CDY06997 | Canola | cytosol | 23.18 | 38.39 |
| CDY43099 | Canola | cytosol | 34.91 | 38.26 |
| CDX93275 | Canola | cytosol | 22.78 | 37.72 |
| CDY28360 | Canola | cytosol | 8.49 | 37.06 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 17.92 | 36.84 |
| CDY06999 | Canola | cytosol | 15.77 | 36.79 |
| CDY65744 | Canola | peroxisome | 13.75 | 35.92 |
| CDY22879 | Canola | cytosol | 20.62 | 35.33 |
| CDY43090 | Canola | cytosol | 13.07 | 35.02 |
| CDY45640 | Canola | cytosol | 12.94 | 31.27 |
| CDY68611 | Canola | cytosol | 10.78 | 30.19 |
| CDY47758 | Canola | cytosol | 21.56 | 30.13 |
| CDY32783 | Canola | cytosol | 21.16 | 30.02 |
| CDX79175 | Canola | cytosol | 12.26 | 29.93 |
| CDY70857 | Canola | cytosol | 16.85 | 29.83 |
| CDX82963 | Canola | cytosol | 16.85 | 29.83 |
| CDY46535 | Canola | cytosol | 15.09 | 29.09 |
| CDY72239 | Canola | cytosol | 11.86 | 28.3 |
| CDY53442 | Canola | cytosol | 14.82 | 27.85 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 19.54 | 25.75 |
| CDY59365 | Canola | cytosol | 27.49 | 25.56 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 4.99 | 24.83 |
| CDY63700 | Canola | cytosol | 19.41 | 24.62 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 7.55 | 24.35 |
| CDX96652 | Canola | extracellular | 19.68 | 23.74 |
| CDX87871 | Canola | cytosol | 27.63 | 22.31 |
| CDY70821 | Canola | cytosol | 13.34 | 22.1 |
| CDX82115 | Canola | extracellular | 7.41 | 22.0 |
| CDY22878 | Canola | cytosol | 27.22 | 20.57 |
| CDY51196 | Canola | cytosol | 22.64 | 18.06 |
| CDY51197 | Canola | cytosol | 21.83 | 18.04 |
| CDY02564 | Canola | cytosol | 22.64 | 17.95 |
| CDY51195 | Canola | cytosol, extracellular | 22.91 | 15.98 |
| CDY02563 | Canola | cytosol, extracellular | 22.78 | 15.94 |
| CDY47825 | Canola | cytosol | 15.09 | 14.12 |
Protein Annotations
| EnsemblPlants:CDY43910 | EnsemblPlantsGene:GSBRNA2T00077492001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDY43910 | ProteinID:CDY43910.1 | SEG:seg |
| SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI0004EDDD9E | UniProt:A0A078HZ73 | MapMan:35.1 | : |
Description
BnaA05g15200DBnaA05g15200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ73]
Coordinates
chrLK032573:-:17927..22840
Molecular Weight (calculated)
81190.7 Da
IEP (calculated)
6.624
GRAVY (calculated)
-0.401
Length
742 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLKVEAKGG NGGKEWDDGF DYEGVTKIHV RGGREGIQFI MFEYVKAGKA TVGPIHGVSD RRGLTQTLEI KHMENEHLVS VEGYYNESTG VIQSLQFETN
101: MKTSDLIGYD EGTKFSLRAR GKKIIGFHGF AEKNLNSLGA YFIRMPPTKS AMQGGQTTGV GYDDGGDYDG VKKDVVTTDG TAIRHIKFHY DKAGNEEIRE
201: RGVTTGTQHE FTINHPYEYI TSVEGSYAVT QPYNCIVLTS LTFKTSKGRT SSTIGPVTGT KFVLESKGNA IVGFHGRVGS CVDSIGAYYS QVFPSQETAL
301: KVEPKGGKGG VQWDDGSDYE GVTKIHVRGG LEGIQFIKFE YKKAGQTIVG PVHGVSGRGM TQTFDIIHLE NEYLRSVEGY YDESTGVIQS LRFITNQKTS
401: DLMGFNEGTK FSLAANGKKI IGFHGFAEKN LNSLGAYFIR IPSTKSAMEG GQTTGRSYDD GGDCDGLRKV YVTFDGTAIR HIKFDYDIAG QVEMRQRGVK
501: EGTEYEFEVD HPREYITSVE GSYAVTQPYG CIVLRSLIFK TSKGRTSSNI GTVTGTKFVH ESKGNVIVGF HGRVGSCIDS IGVYYSPFSP PSPPSEKLQG
601: HGGDGGDFWD DGVFKNVKKI YVGQGDVGIA SLMFEYENET SEMIVGKEHG KKTLLGYEEF ELDYPSEYIT SIEGCHDNVV GAESGVITML RFKTNKRTSP
701: PFGLESASSF AIQKEGYKIV GFHGKSSALI NQIGVHVVPI TE
101: MKTSDLIGYD EGTKFSLRAR GKKIIGFHGF AEKNLNSLGA YFIRMPPTKS AMQGGQTTGV GYDDGGDYDG VKKDVVTTDG TAIRHIKFHY DKAGNEEIRE
201: RGVTTGTQHE FTINHPYEYI TSVEGSYAVT QPYNCIVLTS LTFKTSKGRT SSTIGPVTGT KFVLESKGNA IVGFHGRVGS CVDSIGAYYS QVFPSQETAL
301: KVEPKGGKGG VQWDDGSDYE GVTKIHVRGG LEGIQFIKFE YKKAGQTIVG PVHGVSGRGM TQTFDIIHLE NEYLRSVEGY YDESTGVIQS LRFITNQKTS
401: DLMGFNEGTK FSLAANGKKI IGFHGFAEKN LNSLGAYFIR IPSTKSAMEG GQTTGRSYDD GGDCDGLRKV YVTFDGTAIR HIKFDYDIAG QVEMRQRGVK
501: EGTEYEFEVD HPREYITSVE GSYAVTQPYG CIVLRSLIFK TSKGRTSSNI GTVTGTKFVH ESKGNVIVGF HGRVGSCIDS IGVYYSPFSP PSPPSEKLQG
601: HGGDGGDFWD DGVFKNVKKI YVGQGDVGIA SLMFEYENET SEMIVGKEHG KKTLLGYEEF ELDYPSEYIT SIEGCHDNVV GAESGVITML RFKTNKRTSP
701: PFGLESASSF AIQKEGYKIV GFHGKSSALI NQIGVHVVPI TE
001: MAQKLEAKGG KGGNQWDDLL DHDNIAKIHV QGGHEGIQYV KFDYVKFDNL KIGQPKLGSI HGLSRKGFTQ TFEIDPTSEY IVSVEGYYDE SKGIIQALKF
101: KTNKKTSDMI GYDENGLKFS LEVKGKAIIG FHGFADTNLN SLGAYFAPAP PTKFDYQGGS GAQLWDDGSN YNGVRKVSFS LDDTEIRQIR IEYDKSGLVE
201: KREYGSNVGR QEEFVLDYPT EYIIYMEGTC DIVSDTSKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSPLILSAP
301: APPPPPAEKL QAKGGNGGNQ WDDLADHDHV TKIYVQGGQE GIQYVKFDYV KNGQPQSGSV HGLLGRGFTQ TFEIDPTNEH LVSVEGYYDE SKGLVQGLKF
401: KTNKKTSDMI GYDENGLKFS LEVNGKKIIG FHGYAQTYLN SLGAYFVTAP PTKFDYQGGS GAQLWDDGTN YNGVRKISFA LDANEIRQIR IDYDKGGLIE
501: RREYGGNVGR QEEFVVDYPS EYIIYMEGTC DIVSDASKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSRFILPPS
601: AETLQAKGGE GGDPWSDGVF NGVRNIYVGQ GENGVSAVKF VYDKDSQVAE GNDHGKPTLL GYEEFKLEYP SEYITTVEGC FDKIFGSGGG VITMLKFKTN
701: KRTSPPFGLE TTSNFVLGKE GYKIVGFHGT SSHELHQLGV YVMPI
101: KTNKKTSDMI GYDENGLKFS LEVKGKAIIG FHGFADTNLN SLGAYFAPAP PTKFDYQGGS GAQLWDDGSN YNGVRKVSFS LDDTEIRQIR IEYDKSGLVE
201: KREYGSNVGR QEEFVLDYPT EYIIYMEGTC DIVSDTSKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSPLILSAP
301: APPPPPAEKL QAKGGNGGNQ WDDLADHDHV TKIYVQGGQE GIQYVKFDYV KNGQPQSGSV HGLLGRGFTQ TFEIDPTNEH LVSVEGYYDE SKGLVQGLKF
401: KTNKKTSDMI GYDENGLKFS LEVNGKKIIG FHGYAQTYLN SLGAYFVTAP PTKFDYQGGS GAQLWDDGTN YNGVRKISFA LDANEIRQIR IDYDKGGLIE
501: RREYGGNVGR QEEFVVDYPS EYIIYMEGTC DIVSDASKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSRFILPPS
601: AETLQAKGGE GGDPWSDGVF NGVRNIYVGQ GENGVSAVKF VYDKDSQVAE GNDHGKPTLL GYEEFKLEYP SEYITTVEGC FDKIFGSGGG VITMLKFKTN
701: KRTSPPFGLE TTSNFVLGKE GYKIVGFHGT SSHELHQLGV YVMPI
Arabidopsis Description
JAL4Jacalin-related lectin 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ31]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.