Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69096 | Canola | cytosol | 99.66 | 99.66 |
| Bra018945.1-P | Field mustard | cytosol | 87.69 | 97.34 |
| CDY34134 | Canola | cytosol | 30.09 | 84.62 |
| CDY47824 | Canola | cytosol | 44.79 | 73.39 |
| CDY54394 | Canola | cytosol | 9.91 | 58.0 |
| AT1G60130.1 | Thale cress | cytosol | 59.15 | 57.67 |
| AT1G60095.1 | Thale cress | cytosol | 58.8 | 57.24 |
| AT5G49870.1 | Thale cress | cytosol | 57.61 | 56.07 |
| CDY40959 | Canola | cytosol | 48.55 | 55.69 |
| AT1G52130.1 | Thale cress | cytosol | 45.64 | 55.28 |
| AT5G49850.1 | Thale cress | cytosol | 56.07 | 55.03 |
| AT1G60110.2 | Thale cress | cytosol | 58.46 | 54.98 |
| AT1G52110.1 | Thale cress | mitochondrion | 56.07 | 53.33 |
| CDY21999 | Canola | extracellular | 15.38 | 52.02 |
| CDX90860 | Canola | cytosol | 33.68 | 51.04 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 19.15 | 50.68 |
| CDX82402 | Canola | cytosol, plasma membrane | 24.96 | 49.16 |
| CDX77840 | Canola | cytosol | 7.52 | 46.32 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 16.75 | 45.16 |
| CDY02548 | Canola | cytosol | 33.5 | 45.06 |
| CDY13177 | Canola | extracellular | 23.76 | 43.99 |
| CDX82401 | Canola | cytosol | 19.49 | 42.86 |
| CDY06998 | Canola | cytosol | 15.21 | 42.79 |
| CDX93274 | Canola | cytosol | 16.41 | 42.67 |
| CDY20197 | Canola | cytosol | 14.53 | 41.26 |
| CDY43910 | Canola | cytosol | 51.97 | 40.97 |
| CDY20195 | Canola | cytosol | 29.06 | 40.09 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 14.19 | 39.71 |
| CDX74856 | Canola | cytosol | 30.94 | 39.35 |
| CDY07657 | Canola | cytosol | 30.43 | 39.21 |
| CDY24969 | Canola | cytosol | 30.09 | 38.77 |
| CDY53520 | Canola | cytosol | 19.15 | 38.23 |
| CDX93273 | Canola | cytosol | 29.74 | 38.16 |
| CDY45301 | Canola | cytosol | 18.97 | 37.88 |
| CDY07000 | Canola | cytosol | 28.38 | 37.56 |
| CDX75882 | Canola | cytosol | 18.29 | 37.41 |
| CDY59556 | Canola | cytosol | 28.55 | 37.36 |
| CDY06997 | Canola | cytosol | 28.21 | 36.83 |
| CDY65744 | Canola | peroxisome | 17.61 | 36.27 |
| CDX93275 | Canola | cytosol | 27.69 | 36.16 |
| CDY38589 | Canola | cytosol | 27.69 | 35.37 |
| CDX92074 | Canola | cytosol | 38.63 | 34.77 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 21.37 | 34.63 |
| CDY06999 | Canola | cytosol | 18.63 | 34.28 |
| CDY22879 | Canola | cytosol | 24.96 | 33.72 |
| CDY28360 | Canola | cytosol | 9.74 | 33.53 |
| CDY43099 | Canola | cytosol | 38.46 | 33.23 |
| CDY43090 | Canola | cytosol | 15.38 | 32.49 |
| CDY45640 | Canola | cytosol | 16.24 | 30.94 |
| CDX82963 | Canola | cytosol | 21.54 | 30.07 |
| CDY70857 | Canola | cytosol | 21.54 | 30.07 |
| CDY68611 | Canola | cytosol | 13.5 | 29.81 |
| CDX79175 | Canola | cytosol | 15.38 | 29.61 |
| CDY32783 | Canola | cytosol | 25.3 | 28.3 |
| CDY47758 | Canola | cytosol | 25.3 | 27.87 |
| CDY72239 | Canola | cytosol | 14.7 | 27.65 |
| CDY46535 | Canola | cytosol | 17.95 | 27.27 |
| CDY53442 | Canola | cytosol | 18.29 | 27.09 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 24.79 | 25.75 |
| CDY59365 | Canola | cytosol | 33.16 | 24.31 |
| CDY70821 | Canola | cytosol | 16.92 | 22.1 |
| CDY63700 | Canola | cytosol | 21.2 | 21.2 |
| CDX96652 | Canola | extracellular | 21.37 | 20.33 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 7.69 | 19.57 |
| CDY22878 | Canola | cytosol | 32.82 | 19.55 |
| CDX87871 | Canola | cytosol | 30.6 | 19.48 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 4.79 | 18.79 |
| CDX82115 | Canola | extracellular | 7.86 | 18.4 |
| CDY51197 | Canola | cytosol | 27.69 | 18.04 |
| CDY51196 | Canola | cytosol | 27.18 | 17.1 |
| CDY02564 | Canola | cytosol | 27.35 | 17.09 |
| CDY51195 | Canola | cytosol, extracellular | 27.52 | 15.13 |
| CDY02563 | Canola | cytosol, extracellular | 27.35 | 15.09 |
| CDY47825 | Canola | cytosol | 17.78 | 13.11 |
Protein Annotations
| EnsemblPlants:CDY60590 | EnsemblPlantsGene:GSBRNA2T00029831001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDY60590 | ProteinID:CDY60590.1 | SMART:SM00915 |
| SUPFAM:SSF51101 | UniParc:UPI0004EF25EC | UniProt:A0A078J3S3 | MapMan:35.1 | : | : |
Description
BnaA06g01960DBnaA06g01960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3S3]
Coordinates
chrLK033896:-:10081..12245
Molecular Weight (calculated)
65349.0 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.438
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQRLEAEGS KNGRYIWDDG FNHDDVTKIY VRGGSDGIQF IRFDYIMKGQ LNNGSFHGQS YKGFTQTFEI NHLKHEHLES VNGYYTESTG IQALQFKTNL
101: RISELMGYDE KGTKFTLAVH GKKIIGFHGS KQSNIYSLGA YFTWITPTRM EAKGGNGGKE WDDGSDHEGV TKIHVRGGRK GIQYIKFDYV KDGQPKDGPI
201: HGSISGGGFE PVFEIKHVDQ ECLVSVEGYY DVTSGVIQGL QFKTNFNTSQ LMGYNKGTKF IISENGMKII GFHGYVEKSL KSLGAYFTRL TPMKLECQGA
301: TSGGLLWDDG AFQGIRKVYA YYENNYIMFI SFDYENDGKA EKRDHGFKDG FTGQEGEFVI DYPNECLTSV EGTFSNESEA WITSLTFKTS KGRISQKFGN
401: ERFGDLGILL ESKGCALAGF HGRSDDSVLM AIGAYFYPMS SDANKLEAKG GDGGAFWDDG RFDGVRKIYI GISSNAICFV KFMYYKDARM FFGDDHGNKT
501: QLFGVKEFEL NYPFEYVTSV EGSYDNISGA ITMLRLKTNR QTSPDFGVGT TSSFVVHKDN HMIVGFHGKS GNLLLHKIGV HVIPI
101: RISELMGYDE KGTKFTLAVH GKKIIGFHGS KQSNIYSLGA YFTWITPTRM EAKGGNGGKE WDDGSDHEGV TKIHVRGGRK GIQYIKFDYV KDGQPKDGPI
201: HGSISGGGFE PVFEIKHVDQ ECLVSVEGYY DVTSGVIQGL QFKTNFNTSQ LMGYNKGTKF IISENGMKII GFHGYVEKSL KSLGAYFTRL TPMKLECQGA
301: TSGGLLWDDG AFQGIRKVYA YYENNYIMFI SFDYENDGKA EKRDHGFKDG FTGQEGEFVI DYPNECLTSV EGTFSNESEA WITSLTFKTS KGRISQKFGN
401: ERFGDLGILL ESKGCALAGF HGRSDDSVLM AIGAYFYPMS SDANKLEAKG GDGGAFWDDG RFDGVRKIYI GISSNAICFV KFMYYKDARM FFGDDHGNKT
501: QLFGVKEFEL NYPFEYVTSV EGSYDNISGA ITMLRLKTNR QTSPDFGVGT TSSFVVHKDN HMIVGFHGKS GNLLLHKIGV HVIPI
001: MTQRLEAQGQ KTLDSPFVWD DGSDHDDVTK IHVRGDSRGI NCIRFDYIKS GQRKYKSFYG PSWAGFTQTF KINHKEDEQL ESVEGFYKPD SRTIVGLQFK
101: TNLRISELIG HGKKDDTKFS LAVDGKKIIG FHGCSGSYLE SLGAYFTCIA PTRMEAKGAK GGTDWNDGAD HEGVAKIYVR GGRDCIQYIK FDYVKDRKYI
201: YGPAHGVRGR GFTESFEINH LDNEYMVSVE GYYDEGDSGI IQGIQFRTNI KTSELIGYNN GKKFSLAANG KKIIGFHGYA DQNLNSLGAY FTTSPFIKLE
301: SRESTGDLWD DGTFEGVRKV CIHKQPVLYS VIQFEYVNRG EVENRDLGLR VFIAEEGEFV VNYPYEFIIS VEGTFTNEKD PHVASLTFKT SKGRTSSTFG
401: TPGTKKFVLQ SKGCGVVGFH GVLSNDYISG LGAYFRLLPP LPDGEKVEAK GGDGGASWDD GGFDCIRKIY IGHGEMGIAF VKFLYDKDNK FVVGDDHGSK
501: TLLGVDEFEL EHPDEYLISV EGSYDVVDGS ESEVILMLRF KTNMRTSQVF GLDTTSSFIL EKECHKIVGF HGKIGKMLHQ IGVHVLPIID
101: TNLRISELIG HGKKDDTKFS LAVDGKKIIG FHGCSGSYLE SLGAYFTCIA PTRMEAKGAK GGTDWNDGAD HEGVAKIYVR GGRDCIQYIK FDYVKDRKYI
201: YGPAHGVRGR GFTESFEINH LDNEYMVSVE GYYDEGDSGI IQGIQFRTNI KTSELIGYNN GKKFSLAANG KKIIGFHGYA DQNLNSLGAY FTTSPFIKLE
301: SRESTGDLWD DGTFEGVRKV CIHKQPVLYS VIQFEYVNRG EVENRDLGLR VFIAEEGEFV VNYPYEFIIS VEGTFTNEKD PHVASLTFKT SKGRTSSTFG
401: TPGTKKFVLQ SKGCGVVGFH GVLSNDYISG LGAYFRLLPP LPDGEKVEAK GGDGGASWDD GGFDCIRKIY IGHGEMGIAF VKFLYDKDNK FVVGDDHGSK
501: TLLGVDEFEL EHPDEYLISV EGSYDVVDGS ESEVILMLRF KTNMRTSQVF GLDTTSSFIL EKECHKIVGF HGKIGKMLHQ IGVHVLPIID
Arabidopsis Description
JAL18Jacalin-related lectin 18 [Source:UniProtKB/Swiss-Prot;Acc:O80737]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.