CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72239	Canola	cytosol	66.45	65.59
CDY70821	Canola	cytosol	75.57	51.79
CDX93274	Canola	cytosol	26.71	36.44
CDY06998	Canola	cytosol	24.43	36.06
CDY65744	Canola	peroxisome	32.9	35.56
CDY22879	Canola	cytosol	42.67	30.25
CDY21999	Canola	extracellular	16.29	28.9
CDX90860	Canola	cytosol	36.16	28.76
CDY68611	Canola	cytosol	22.48	26.04
CDY54394	Canola	cytosol	8.47	26.0
CDX79175	Canola	cytosol	25.41	25.66
CDX87871	Canola	cytosol	75.9	25.35
CDY22878	Canola	cytosol	79.48	24.85
CDY59556	Canola	cytosol	35.83	24.61
CDY20195	Canola	cytosol	33.22	24.06
CDY44637	Canola	cytosol, mitochondrion, plastid	28.01	23.82
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	15.96	23.45
CDY07657	Canola	cytosol	34.53	23.35
CDX93275	Canola	cytosol	33.88	23.21
CDY06997	Canola	cytosol	33.88	23.21
CDY24969	Canola	cytosol	34.2	23.13
CDX74856	Canola	cytosol	33.88	22.61
CDY07000	Canola	cytosol	32.25	22.4
CDX93273	Canola	cytosol	33.22	22.37
CDY20197	Canola	cytosol	14.98	22.33
CDY38589	Canola	cytosol	33.22	22.27
CDX82963	Canola	cytosol	30.29	22.2
CDY70857	Canola	cytosol	29.97	21.96
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	9.77	20.13
CDX77840	Canola	cytosol	6.19	20.0
CDY32783	Canola	cytosol	32.25	18.93
CDY47758	Canola	cytosol	32.57	18.83
CDY53520	Canola	cytosol	17.92	18.77
CDY45301	Canola	cytosol	17.92	18.77
CDY02548	Canola	cytosol	26.38	18.62
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	33.88	18.47
CDX82402	Canola	cytosol, plasma membrane	16.61	17.17
CDY60590	Canola	cytosol	30.94	16.24
CDY69096	Canola	cytosol	30.94	16.24
CDY28360	Canola	cytosol	8.79	15.88
CDY13177	Canola	extracellular	16.29	15.82
CDY06999	Canola	cytosol	15.96	15.41
CDX92074	Canola	cytosol	32.57	15.38
CDY43099	Canola	cytosol	32.9	14.92
CDY46535	Canola	cytosol	18.57	14.81
CDX82401	Canola	cytosol	12.38	14.29
CDY53442	Canola	cytosol	18.24	14.18
CDY40959	Canola	cytosol	23.45	14.12
CDY63700	Canola	cytosol	26.71	14.02
CDX96652	Canola	extracellular	27.04	13.5
CDY43910	Canola	cytosol	31.27	12.94
CDY59365	Canola	cytosol	30.94	11.9
CDY02564	Canola	cytosol	35.5	11.65
CDY51196	Canola	cytosol	34.85	11.51
CDY51197	Canola	cytosol	33.55	11.47
CDY02563	Canola	cytosol, extracellular	34.2	9.91
CDY28362	Canola	cytosol, nucleus, plastid	6.84	9.68
CDY51195	Canola	cytosol, extracellular	33.22	9.59
CDX75882	Canola	cytosol	7.82	8.39
CDY48032	Canola	cytosol, extracellular, nucleus	6.19	8.26
CDX82115	Canola	extracellular	6.51	8.0
CDY47825	Canola	cytosol	20.52	7.94
CDY47824	Canola	cytosol	4.23	3.64
CDY43090	Canola	cytosol	0.0	0.0
CDY34134	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY45640	EnsemblPlantsGene:GSBRNA2T00082393001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY45640	ProteinID:CDY45640.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EEEC67	UniProt:A0A078I495	MapMan:35.1	:

Description

BnaA05g15070DBnaA05g15070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I495]

Coordinates

chrLK032631:+:100061..101709

Molecular Weight (calculated)

33241.6 Da

IEP (calculated)

6.055

GRAVY (calculated)

-0.560

Length

307 amino acids

Sequence
(BLAST)

001: MAKMEPLGGN KGEGFNDVGY EGVKKITVGA EDVNITYIKI EYVKNGKVEI REHGAAHGEL KEFSVDYPKD SITAVGGTYK HIYSYDTTLI TSLYFTTSKG
101: FTSPLFGEMK GTEFEFKGEH GEKLIGFHGR SSNAIDAIGA YFSTGDNSNS GSGSNSEFST QKLDAQGGKG GNQWDDGGDH DGVTKIHVAV GRGIEQIRFD
201: YLKNRQTNEG PAHGVKGGRS SIRTFEISRP NEYLLSVKGW SDSTNKIVGI KFITNTNTSE CYGFEKTPGE EGTDISLEVK DKKIVGFHGF ADSQVNSLGA
301: YFAPVAS

Best Arabidopsis Sequence Match ( AT1G33790.2 )
(BLAST)

001: MAQKLEAKGG KGGNQWDDLL DHDNIAKIHV QGGHEGIQYV KFDYVKFDNL KIGQPKLGSI HGLSRKGFTQ TFEIDPTSEY IVSVEGYYDE SKGIIQALKF
101: KTNKKTSDMI GYDENGLKFS LEVKGKAIIG FHGFADTNLN SLGAYFAPAP PTKFDYQGGS GAQLWDDGSN YNGVRKVSFS LDDTEIRQIR IEYDKSGLVE
201: KREYGSNVGR QEEFVLDYPT EYIIYMEGTC DIVSDTSKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSPLILSAP
301: APPPPPAEKL QAKGGNGGNQ WDDLADHDHV TKIYVQGGQE GIQYVKFDYV KNGQPQSGSV HGLLGRGFTQ TFEIDPTNEH LVSVEGYYDE SKGLVQGLKF
401: KTNKKTSDMI GYDENGLKFS LEVNGKKIIG FHGYAQTYLN SLGAYFVTAP PTKFDYQGGS GAQLWDDGTN YNGVRKISFA LDANEIRQIR IDYDKGGLIE
501: RREYGGNVGR QEEFVVDYPS EYIIYMEGTC DIVSDASKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSRFILPPS
601: AETLQAKGGE GGDPWSDGVF NGVRNIYVGQ GENGVSAVKF VYDKDSQVAE GNDHGKPTLL GYEEFKLEYP SEYITTVEGC FDKIFGSGGG VITMLKFKTN
701: KRTSPPFGLE TTSNFVLGKE GYKIVGFHGT SSHELHQLGV YVMPI

Arabidopsis Description

JAL4Jacalin-related lectin 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.