CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45640	Canola	cytosol	51.79	75.57
CDY72239	Canola	cytosol	48.44	69.77
CDY22878	Canola	cytosol	96.88	44.2
CDX93274	Canola	cytosol	20.09	40.0
CDY06998	Canola	cytosol	18.3	39.42
Bra018940.1-P	Field mustard	cytosol	96.88	36.81
CDY65744	Canola	peroxisome	22.54	35.56
CDY21999	Canola	extracellular	12.5	32.37
CDY54394	Canola	cytosol	6.92	31.0
CDY22879	Canola	cytosol	28.35	29.33
CDX90860	Canola	cytosol	24.55	28.5
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	32.59	25.93
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	12.05	25.84
CDY59556	Canola	cytosol	25.67	25.73
CDX79175	Canola	cytosol	17.41	25.66
CDX87871	Canola	cytosol	51.12	24.92
CDY68611	Canola	cytosol	14.73	24.91
CDY20197	Canola	cytosol	11.16	24.27
CDY44637	Canola	cytosol, mitochondrion, plastid	19.42	24.1
CDY07657	Canola	cytosol	24.33	24.01
CDY38589	Canola	cytosol	24.11	23.58
CDY24969	Canola	cytosol	23.88	23.57
CDY07000	Canola	cytosol	23.21	23.53
CDX93273	Canola	cytosol	23.66	23.25
CDX93275	Canola	cytosol	23.21	23.21
CDY06997	Canola	cytosol	22.99	22.99
CDX74856	Canola	cytosol	23.44	22.83
CDY20195	Canola	cytosol	21.21	22.41
CDX77840	Canola	cytosol	4.46	21.05
CDX82963	Canola	cytosol	19.64	21.0
CDY45301	Canola	cytosol	13.62	20.82
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.92	20.81
CDY70857	Canola	cytosol	19.42	20.76
CDY53520	Canola	cytosol	13.39	20.48
CDY02564	Canola	cytosol	39.96	19.12
CDY32783	Canola	cytosol	22.1	18.93
CDY51196	Canola	cytosol	39.29	18.92
CDX82402	Canola	cytosol, plasma membrane	12.5	18.86
CDY47758	Canola	cytosol	22.1	18.64
CDY51197	Canola	cytosol	36.83	18.37
CDY02548	Canola	cytosol	17.41	17.93
CDX82401	Canola	cytosol	10.27	17.29
CDY60590	Canola	cytosol	22.1	16.92
CDY69096	Canola	cytosol	22.1	16.92
CDY28360	Canola	cytosol	6.25	16.47
CDY13177	Canola	extracellular	11.38	16.14
CDY46535	Canola	cytosol	13.39	15.58
CDY59365	Canola	cytosol	27.68	15.54
CDY02563	Canola	cytosol, extracellular	36.16	15.28
CDY51195	Canola	cytosol, extracellular	35.94	15.13
CDX92074	Canola	cytosol	21.88	15.08
CDY53442	Canola	cytosol	13.17	14.94
CDY47825	Canola	cytosol	25.89	14.63
CDY43099	Canola	cytosol	22.1	14.62
CDY06999	Canola	cytosol	10.04	14.15
CDY63700	Canola	cytosol	18.3	14.02
CDY40959	Canola	cytosol	15.4	13.53
CDX96652	Canola	extracellular	18.53	13.5
CDY43910	Canola	cytosol	22.1	13.34
CDY28362	Canola	cytosol, nucleus, plastid	5.58	11.52
CDX75882	Canola	cytosol	6.25	9.79
CDY48032	Canola	cytosol, extracellular, nucleus	4.46	8.7
CDX82115	Canola	extracellular	4.24	7.6
CDY47824	Canola	cytosol	2.9	3.64
CDY43090	Canola	cytosol	0.22	0.36
CDY34134	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY70821	EnsemblPlantsGene:GSBRNA2T00007757001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY70821	ProteinID:CDY70821.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EEB7AE	UniProt:A0A078JZ45	MapMan:35.1	:

Description

BnaCnng69940DBnaCnng69940D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZ45]

Coordinates

chrLK043441:-:1201..3025

Molecular Weight (calculated)

48104.9 Da

IEP (calculated)

5.623

GRAVY (calculated)

-0.503

Length

448 amino acids

Sequence
(BLAST)

001: EGVKKITVGA DNLSITYIKI EYVKDGKVEV REHGTARGKL KEFSVDYPND SITEVGGTYK HNYTYDTTLI TSLYFTTSKG FTSPLFGIDS EKKGTEFEFK
101: DENGGKLIGF HGRGGNAIDA IGAYFDTGSK PGGTGDSGSG SNSGSSPQKL DAQGGKGGNQ WDDSGDHDGV TKIHVAFSRV IEQIKFEYVK NGETKEGPAH
201: GVKGGARTMT GTFEISHPNE YLLSVKGWSD SSNKIVGIQF TTNTKTSDYY GFEKYPGDEG TDILLEVKDK KIVGFHGFAD TQLNSVGAYF APIASTPLKP
301: SKKLQAVGGD EGASWDDGAF DGVKKIQVGQ NNDGVSFVAV EYQNGSQKVV GDGHGKQSPL GVETFELTDG EYITSVGVYY DKIHAEGRGV TVVTSLIFKT
401: NKQISQPFGM TGGEYVELKE EGNKIVGFHG KASDWVHQIG VYVAPVTI

Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)

001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE

Arabidopsis Description

JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.