Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47824 | Canola | cytosol | 79.33 | 46.22 |
| CDY60590 | Canola | cytosol | 84.62 | 30.09 |
| CDY69096 | Canola | cytosol | 84.13 | 29.91 |
| AT1G52130.1 | Thale cress | cytosol | 52.4 | 22.57 |
| CDY40959 | Canola | cytosol | 49.52 | 20.2 |
| AT1G60130.1 | Thale cress | cytosol | 54.33 | 18.83 |
| AT5G49870.1 | Thale cress | cytosol | 53.85 | 18.64 |
| AT5G49850.1 | Thale cress | cytosol | 51.92 | 18.12 |
| AT1G60095.1 | Thale cress | cytosol | 50.96 | 17.64 |
| AT1G52110.1 | Thale cress | mitochondrion | 51.92 | 17.56 |
| AT1G60110.2 | Thale cress | cytosol | 50.48 | 16.88 |
| CDY43090 | Canola | cytosol | 19.71 | 14.8 |
| CDY43910 | Canola | cytosol | 46.63 | 13.07 |
| CDY28360 | Canola | cytosol | 5.77 | 7.06 |
| CDY43099 | Canola | cytosol | 20.67 | 6.35 |
| CDY13177 | Canola | extracellular | 9.62 | 6.33 |
| CDX92074 | Canola | cytosol | 19.71 | 6.31 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 6.25 | 5.99 |
| CDX82402 | Canola | cytosol, plasma membrane | 7.21 | 5.05 |
| CDY54394 | Canola | cytosol | 2.4 | 5.0 |
| CDX75882 | Canola | cytosol | 6.73 | 4.9 |
| CDX82401 | Canola | cytosol | 6.25 | 4.89 |
| CDY20197 | Canola | cytosol | 4.81 | 4.85 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 5.29 | 4.78 |
| CDY59365 | Canola | cytosol | 18.27 | 4.76 |
| CDX82115 | Canola | extracellular | 5.29 | 4.4 |
| CDX87871 | Canola | cytosol | 19.23 | 4.35 |
| CDY22878 | Canola | cytosol | 20.19 | 4.28 |
| CDY06997 | Canola | cytosol | 7.69 | 3.57 |
| CDY06999 | Canola | cytosol | 5.29 | 3.46 |
| CDX93275 | Canola | cytosol | 6.73 | 3.12 |
| CDY07657 | Canola | cytosol | 6.73 | 3.08 |
| CDY45301 | Canola | cytosol | 4.33 | 3.07 |
| CDY53520 | Canola | cytosol | 4.33 | 3.07 |
| CDY02548 | Canola | cytosol | 6.25 | 2.99 |
| CDY24969 | Canola | cytosol | 6.25 | 2.86 |
| CDY46535 | Canola | cytosol | 5.29 | 2.86 |
| CDX74856 | Canola | cytosol | 6.25 | 2.83 |
| CDY65744 | Canola | peroxisome | 3.85 | 2.82 |
| CDY53442 | Canola | cytosol | 5.29 | 2.78 |
| CDY38589 | Canola | cytosol | 5.77 | 2.62 |
| CDY22879 | Canola | cytosol | 5.29 | 2.54 |
| CDY07000 | Canola | cytosol | 5.29 | 2.49 |
| CDX93273 | Canola | cytosol | 5.29 | 2.41 |
| CDY20195 | Canola | cytosol | 4.81 | 2.36 |
| CDX96652 | Canola | extracellular | 6.73 | 2.28 |
| CDY32783 | Canola | cytosol | 5.29 | 2.1 |
| CDY47758 | Canola | cytosol | 5.29 | 2.07 |
| CDY63700 | Canola | cytosol | 5.77 | 2.05 |
| CDY59556 | Canola | cytosol | 4.33 | 2.01 |
| CDY21999 | Canola | extracellular | 1.44 | 1.73 |
| CDY51197 | Canola | cytosol | 6.25 | 1.45 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 1.44 | 1.44 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 1.44 | 1.36 |
| CDY51196 | Canola | cytosol | 5.77 | 1.29 |
| CDY02564 | Canola | cytosol | 5.77 | 1.28 |
| CDY47825 | Canola | cytosol | 4.81 | 1.26 |
| CDY51195 | Canola | cytosol, extracellular | 6.25 | 1.22 |
| CDY02563 | Canola | cytosol, extracellular | 5.29 | 1.04 |
| CDY06998 | Canola | cytosol | 0.96 | 0.96 |
| CDY70857 | Canola | cytosol | 1.92 | 0.95 |
| CDX82963 | Canola | cytosol | 1.92 | 0.95 |
| CDX93274 | Canola | cytosol | 0.96 | 0.89 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 1.44 | 0.83 |
| CDY68611 | Canola | cytosol | 0.48 | 0.38 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 0.96 | 0.36 |
| CDX79175 | Canola | cytosol | 0.48 | 0.33 |
| CDX90860 | Canola | cytosol | 0.48 | 0.26 |
| CDX77840 | Canola | cytosol | 0.0 | 0.0 |
| CDY70821 | Canola | cytosol | 0.0 | 0.0 |
| CDY45640 | Canola | cytosol | 0.0 | 0.0 |
| CDY72239 | Canola | cytosol | 0.0 | 0.0 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY34134 | EnsemblPlantsGene:GSBRNA2T00056096001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | ProteinID:CDY34134 | ProteinID:CDY34134.1 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI0004EE1559 | UniProt:A0A078H9H2 | MapMan:35.1 | : | : | : |
Description
BnaC01g28740DBnaC01g28740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9H2]
Coordinates
chrLK032329:+:303404..304162
Molecular Weight (calculated)
20326.7 Da
IEP (calculated)
7.316
GRAVY (calculated)
-0.654
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQRLEAEGS KNGRYIWDDG FNHDDVTKIY VRGGSDGIQF IRFDYIMKGQ LNNGSFHGQS YKGFTQTFEI NHLKHEHLES VNGYYTESTG IQALQFKTNL
101: RISELMGYDE KGTKFTLAVH GKKIIGFHGS KQSNIYSLGA YFTWITPTRM EAKGGNGGKE WDDGSDHEGX XXXXXXXXXX XXXXXXXXXX XXXXXXXXFG
201: RKVTYENV
101: RISELMGYDE KGTKFTLAVH GKKIIGFHGS KQSNIYSLGA YFTWITPTRM EAKGGNGGKE WDDGSDHEGX XXXXXXXXXX XXXXXXXXXX XXXXXXXXFG
201: RKVTYENV
001: MTQKLESVGS ERKSSEYMWD DGSEHDDVTK IYVRGGTKGI EFIKFGYVKA GELLDGSFHG YSDTGFTQMF EIDHRKNEHL LSVEGYFDYY NDIMYAIQFK
101: TNLKISEIMG YEYSGHKFTL AMEGKKIIGF HGFADVNLRA LGAYVTWITP ARMEAKGGKG GNEWDDGGDY EAVTKIHGRS DHKGIKDIIF DYVDKDGHPK
201: SETHGPTSGQ GYVLEPFEIN HLDKEYLMSI DGYYDDASGV IQALQFKTNM KTSELMGYYD DDAVKFTIGC TVNKIIGFHG HAGKNLYSLG AYFTTLPLTK
301: LEYEDSFREK LPKNGASGNL WDDGSFQGVK KVHIYYDGYS VRCVRFDYDD DGKVESREHG PKIVAAVQEG GFVLDYPNEV ITSVEGIATV VNTGLSFSTG
401: NVMIKSLTFK TSKGRTSPTF GNVFGNYLSE FKLESQGCAI VGFHGRSSYN SIHGLGAYFF PMPPSHDGKA LEEQGGDGGL GGV
101: TNLKISEIMG YEYSGHKFTL AMEGKKIIGF HGFADVNLRA LGAYVTWITP ARMEAKGGKG GNEWDDGGDY EAVTKIHGRS DHKGIKDIIF DYVDKDGHPK
201: SETHGPTSGQ GYVLEPFEIN HLDKEYLMSI DGYYDDASGV IQALQFKTNM KTSELMGYYD DDAVKFTIGC TVNKIIGFHG HAGKNLYSLG AYFTTLPLTK
301: LEYEDSFREK LPKNGASGNL WDDGSFQGVK KVHIYYDGYS VRCVRFDYDD DGKVESREHG PKIVAAVQEG GFVLDYPNEV ITSVEGIATV VNTGLSFSTG
401: NVMIKSLTFK TSKGRTSPTF GNVFGNYLSE FKLESQGCAI VGFHGRSSYN SIHGLGAYFF PMPPSHDGKA LEEQGGDGGL GGV
Arabidopsis Description
JAL13Jacalin-related lectin 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.