Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34134 | Canola | cytosol | 22.57 | 52.4 |
| Bra018945.1-P | Field mustard | cytosol | 55.28 | 50.66 |
| AT5G38540.1 | Thale cress | cytosol | 45.76 | 47.22 |
| CDY69096 | Canola | cytosol | 55.28 | 45.64 |
| CDY60590 | Canola | cytosol | 55.28 | 45.64 |
| CDY47824 | Canola | cytosol | 33.54 | 45.38 |
| AT1G60095.1 | Thale cress | cytosol | 52.8 | 42.43 |
| AT1G60110.2 | Thale cress | cytosol | 51.14 | 39.71 |
| AT5G38550.1 | Thale cress | cytosol | 48.65 | 39.56 |
| AT1G60130.1 | Thale cress | cytosol | 49.07 | 39.5 |
| AT5G49850.1 | Thale cress | cytosol | 47.2 | 38.26 |
| AT5G49870.1 | Thale cress | cytosol | 47.41 | 38.1 |
| AT1G57570.1 | Thale cress | mitochondrion | 48.03 | 37.78 |
| AT1G52110.1 | Thale cress | mitochondrion | 47.41 | 37.24 |
| AT1G61230.1 | Thale cress | cytosol | 37.89 | 36.24 |
| AT1G52100.1 | Thale cress | cytosol | 31.88 | 35.24 |
| AT5G35940.1 | Thale cress | cytosol | 32.09 | 34.91 |
| AT2G25980.1 | Thale cress | cytosol | 32.09 | 34.52 |
| AT5G35950.1 | Thale cress | cytosol | 30.85 | 33.56 |
| AT5G28520.1 | Thale cress | cytosol | 28.78 | 30.68 |
| AT1G33790.2 | Thale cress | cytosol | 44.51 | 28.86 |
| AT1G52060.1 | Thale cress | extracellular | 17.81 | 27.39 |
| AT1G52070.1 | Thale cress | extracellular | 17.6 | 26.98 |
| AT1G52050.1 | Thale cress | extracellular | 17.18 | 26.52 |
| AT3G16430.2 | Thale cress | cytosol | 15.94 | 26.01 |
| AT2G39310.4 | Thale cress | cytosol | 24.02 | 25.33 |
| AT3G16470.1 | Thale cress | cytosol | 23.4 | 25.06 |
| AT3G16420.1 | Thale cress | cytosol | 15.32 | 24.83 |
| AT1G73040.1 | Thale cress | cytosol | 8.7 | 23.86 |
| AT2G39330.2 | Thale cress | cytosol | 24.84 | 23.67 |
| AT1G52120.2 | Thale cress | cytosol | 22.15 | 23.31 |
| AT3G21380.1 | Thale cress | cytosol | 20.7 | 21.74 |
| AT5G46000.1 | Thale cress | cytosol | 16.98 | 20.71 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 9.32 | 20.36 |
| AT3G16460.1 | Thale cress | cytosol | 29.4 | 20.14 |
| AT3G16450.2 | Thale cress | cytosol | 12.22 | 19.67 |
| AT3G16440.2 | Thale cress | cytosol | 13.04 | 19.5 |
| AT1G52030.2 | Thale cress | cytosol | 23.4 | 17.6 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 18.84 | 15.14 |
| AT1G52000.2 | Thale cress | cytosol | 17.39 | 11.51 |
| AT1G52040.1 | Thale cress | cytosol | 10.56 | 11.04 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 3.31 | 10.74 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:841643 | ProteinID:AAD12687.1 | ProteinID:AEE32758.1 | ProteinID:ANM59235.1 |
| ArrayExpress:AT1G52130 | EnsemblPlantsGene:AT1G52130 | RefSeq:AT1G52130 | TAIR:AT1G52130 | RefSeq:AT1G52130-TAIR-G | EnsemblPlants:AT1G52130.1 |
| TAIR:AT1G52130.1 | Unigene:At.52152 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 |
| InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001319204.1 | RefSeq:NP_175625.1 |
| PFAM:PF01419 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | UniProt:Q9ZU13 | SMART:SM00915 |
| SUPFAM:SSF51101 | UniParc:UPI00000A8364 | SEG:seg | : | : | : |
Description
JAL13Jacalin-related lectin 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU13]
Coordinates
chr1:-:19400510..19402789
Molecular Weight (calculated)
53571.7 Da
IEP (calculated)
5.437
GRAVY (calculated)
-0.450
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQKLESVGS ERKSSEYMWD DGSEHDDVTK IYVRGGTKGI EFIKFGYVKA GELLDGSFHG YSDTGFTQMF EIDHRKNEHL LSVEGYFDYY NDIMYAIQFK
101: TNLKISEIMG YEYSGHKFTL AMEGKKIIGF HGFADVNLRA LGAYVTWITP ARMEAKGGKG GNEWDDGGDY EAVTKIHGRS DHKGIKDIIF DYVDKDGHPK
201: SETHGPTSGQ GYVLEPFEIN HLDKEYLMSI DGYYDDASGV IQALQFKTNM KTSELMGYYD DDAVKFTIGC TVNKIIGFHG HAGKNLYSLG AYFTTLPLTK
301: LEYEDSFREK LPKNGASGNL WDDGSFQGVK KVHIYYDGYS VRCVRFDYDD DGKVESREHG PKIVAAVQEG GFVLDYPNEV ITSVEGIATV VNTGLSFSTG
401: NVMIKSLTFK TSKGRTSPTF GNVFGNYLSE FKLESQGCAI VGFHGRSSYN SIHGLGAYFF PMPPSHDGKA LEEQGGDGGL GGV
101: TNLKISEIMG YEYSGHKFTL AMEGKKIIGF HGFADVNLRA LGAYVTWITP ARMEAKGGKG GNEWDDGGDY EAVTKIHGRS DHKGIKDIIF DYVDKDGHPK
201: SETHGPTSGQ GYVLEPFEIN HLDKEYLMSI DGYYDDASGV IQALQFKTNM KTSELMGYYD DDAVKFTIGC TVNKIIGFHG HAGKNLYSLG AYFTTLPLTK
301: LEYEDSFREK LPKNGASGNL WDDGSFQGVK KVHIYYDGYS VRCVRFDYDD DGKVESREHG PKIVAAVQEG GFVLDYPNEV ITSVEGIATV VNTGLSFSTG
401: NVMIKSLTFK TSKGRTSPTF GNVFGNYLSE FKLESQGCAI VGFHGRSSYN SIHGLGAYFF PMPPSHDGKA LEEQGGDGGL GGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.