Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G52070.1 | Thale cress | extracellular | 81.85 | 81.59 |
| AT1G52050.1 | Thale cress | extracellular | 71.97 | 72.2 |
| AT3G16430.2 | Thale cress | cytosol | 42.68 | 45.27 |
| AT3G16420.1 | Thale cress | cytosol | 41.08 | 43.29 |
| AT2G25980.1 | Thale cress | cytosol | 50.0 | 34.97 |
| AT3G16450.2 | Thale cress | cytosol | 31.53 | 33.0 |
| AT5G28520.1 | Thale cress | cytosol | 45.54 | 31.57 |
| AT5G35940.1 | Thale cress | cytosol | 42.99 | 30.41 |
| AT3G16440.2 | Thale cress | cytosol | 31.21 | 30.34 |
| AT5G35950.1 | Thale cress | cytosol | 42.36 | 29.95 |
| AT1G52100.1 | Thale cress | cytosol | 40.76 | 29.29 |
| AT1G52120.2 | Thale cress | cytosol | 41.72 | 28.54 |
| AT1G61230.1 | Thale cress | cytosol | 43.31 | 26.93 |
| AT3G16470.1 | Thale cress | cytosol | 37.9 | 26.39 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 18.47 | 26.24 |
| AT2G39310.4 | Thale cress | cytosol | 36.62 | 25.11 |
| AT1G57570.1 | Thale cress | mitochondrion | 49.04 | 25.08 |
| AT1G60095.1 | Thale cress | cytosol | 47.13 | 24.63 |
| AT1G60130.1 | Thale cress | cytosol | 45.86 | 24.0 |
| AT1G60110.2 | Thale cress | cytosol | 46.82 | 23.63 |
| AT5G49850.1 | Thale cress | cytosol | 43.31 | 22.82 |
| AT5G49870.1 | Thale cress | cytosol | 42.68 | 22.3 |
| AT1G52110.1 | Thale cress | mitochondrion | 42.68 | 21.79 |
| AT5G38550.1 | Thale cress | cytosol | 41.08 | 21.72 |
| AT2G39330.2 | Thale cress | cytosol | 35.03 | 21.7 |
| AT1G33790.2 | Thale cress | cytosol | 49.04 | 20.67 |
| AT3G21380.1 | Thale cress | cytosol | 29.94 | 20.43 |
| AT3G16460.1 | Thale cress | cytosol | 42.68 | 19.01 |
| AT5G46000.1 | Thale cress | cytosol | 23.89 | 18.94 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 8.92 | 18.79 |
| AT5G38540.1 | Thale cress | cytosol | 27.71 | 18.59 |
| AT1G52130.1 | Thale cress | cytosol | 27.39 | 17.81 |
| AT1G52030.2 | Thale cress | cytosol | 32.8 | 16.04 |
| AT1G73040.1 | Thale cress | cytosol | 8.92 | 15.91 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 29.62 | 15.47 |
| AT1G52000.2 | Thale cress | cytosol | 27.71 | 11.92 |
| AT1G52040.1 | Thale cress | cytosol | 16.88 | 11.47 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:841635 | ProteinID:AAD12680.1 | ProteinID:AEE32751.1 | ArrayExpress:AT1G52060 |
| EnsemblPlantsGene:AT1G52060 | RefSeq:AT1G52060 | TAIR:AT1G52060 | RefSeq:AT1G52060-TAIR-G | EnsemblPlants:AT1G52060.1 | TAIR:AT1G52060.1 |
| UniProt:F4IB95 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 |
| InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_175618.2 | PFAM:PF01419 | PO:PO:0009005 |
| PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | SMART:SM00915 | SUPFAM:SSF51101 | SignalP:SignalP-noTM |
| UniParc:UPI00015057A8 | SEG:seg | : | : | : | : |
Description
JAL9Jacalin-related lectin 9 [Source:UniProtKB/Swiss-Prot;Acc:F4IB95]
Coordinates
chr1:-:19358800..19360822
Molecular Weight (calculated)
34162.2 Da
IEP (calculated)
5.181
GRAVY (calculated)
-0.210
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFIYIFLFL SSAIIDSNGF AMAQKLEAKG GKGGKEWDDG AGHDNVAKVY IRGGLEGIQY IKFDYVKDGQ SVEGSIHGVS GSGFTQMFEI DYQNGEHIVS
101: VDGYFDKSGV MQALEFKTNR KTSEVIGYPK SNTKFSLGGV NGKMINGFHG SAGKALNSIG AYLTKVPPTK SELVGGWGGD YWDDGPNYDG VRKVYVTYMN
201: TCIRSINIDY EKDGQVVTSS HGNKEGETEE FAIDYPNEFL ISVEGTYDSI LFPDHYVLVI TSLSFKTSKG RISPTYGVVS GTKFVLESQG NAIVGFYGRN
301: GGAFDAIGVY FSPI
101: VDGYFDKSGV MQALEFKTNR KTSEVIGYPK SNTKFSLGGV NGKMINGFHG SAGKALNSIG AYLTKVPPTK SELVGGWGGD YWDDGPNYDG VRKVYVTYMN
201: TCIRSINIDY EKDGQVVTSS HGNKEGETEE FAIDYPNEFL ISVEGTYDSI LFPDHYVLVI TSLSFKTSKG RISPTYGVVS GTKFVLESQG NAIVGFYGRN
301: GGAFDAIGVY FSPI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.