Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005053.1-P | Field mustard | cytosol | 79.04 | 79.21 |
| CDX74856 | Canola | cytosol | 79.48 | 79.13 |
| CDY24969 | Canola | cytosol | 74.67 | 75.33 |
| CDY07657 | Canola | cytosol | 74.45 | 75.11 |
| Bra000129.1-P | Field mustard | cytosol | 74.24 | 74.89 |
| AT2G39330.2 | Thale cress | cytosol | 81.66 | 73.77 |
| Bra017083.1-P | Field mustard | cytosol | 58.73 | 73.7 |
| CDY06999 | Canola | cytosol | 50.22 | 72.33 |
| CDX93273 | Canola | cytosol | 71.18 | 71.49 |
| CDY38589 | Canola | cytosol | 69.87 | 69.87 |
| Bra017082.1-P | Field mustard | cytosol | 67.03 | 69.46 |
| CDY07000 | Canola | cytosol | 66.81 | 69.23 |
| AT3G16450.2 | Thale cress | cytosol | 31.44 | 48.0 |
| AT2G25980.1 | Thale cress | cytosol | 44.98 | 45.88 |
| AT3G16470.1 | Thale cress | cytosol | 44.98 | 45.68 |
| AT3G16430.2 | Thale cress | cytosol | 29.26 | 45.27 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 21.83 | 45.25 |
| AT3G16420.1 | Thale cress | cytosol | 29.04 | 44.63 |
| AT3G16440.2 | Thale cress | cytosol | 31.0 | 43.96 |
| AT1G52100.1 | Thale cress | cytosol | 39.08 | 40.96 |
| AT5G35940.1 | Thale cress | cytosol | 39.52 | 40.77 |
| AT5G28520.1 | Thale cress | cytosol | 39.74 | 40.18 |
| AT3G21380.1 | Thale cress | cytosol | 39.74 | 39.57 |
| AT5G35950.1 | Thale cress | cytosol | 37.99 | 39.19 |
| AT1G52060.1 | Thale cress | extracellular | 25.11 | 36.62 |
| AT1G61230.1 | Thale cress | cytosol | 38.65 | 35.05 |
| AT1G52050.1 | Thale cress | extracellular | 23.58 | 34.5 |
| AT1G52070.1 | Thale cress | extracellular | 23.58 | 34.29 |
| AT5G46000.1 | Thale cress | cytosol | 28.38 | 32.83 |
| AT1G52030.2 | Thale cress | cytosol | 43.89 | 31.31 |
| AT1G60095.1 | Thale cress | cytosol | 40.61 | 30.95 |
| AT1G60110.2 | Thale cress | cytosol | 41.92 | 30.87 |
| AT1G57570.1 | Thale cress | mitochondrion | 40.39 | 30.13 |
| AT1G52120.2 | Thale cress | cytosol | 29.91 | 29.85 |
| AT1G60130.1 | Thale cress | cytosol | 39.08 | 29.83 |
| AT5G49850.1 | Thale cress | cytosol | 37.99 | 29.19 |
| AT5G38550.1 | Thale cress | cytosol | 37.77 | 29.12 |
| AT5G49870.1 | Thale cress | cytosol | 38.21 | 29.12 |
| AT1G52110.1 | Thale cress | mitochondrion | 38.43 | 28.62 |
| AT3G16460.1 | Thale cress | cytosol | 41.05 | 26.67 |
| AT1G52040.1 | Thale cress | cytosol | 26.86 | 26.62 |
| AT1G33790.2 | Thale cress | cytosol | 42.36 | 26.04 |
| AT5G38540.1 | Thale cress | cytosol | 24.67 | 24.15 |
| AT1G52130.1 | Thale cress | cytosol | 25.33 | 24.02 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 28.6 | 21.8 |
| AT1G73040.1 | Thale cress | cytosol | 8.3 | 21.59 |
| AT1G52000.2 | Thale cress | cytosol | 32.97 | 20.68 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 6.55 | 20.13 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:818516 | ProteinID:AAC28979.1 | ProteinID:AEC09658.1 | ProteinID:AEC09659.1 |
| ProteinID:AEC09660.1 | ProteinID:ANM61403.1 | ArrayExpress:AT2G39310 | EnsemblPlantsGene:AT2G39310 | RefSeq:AT2G39310 | TAIR:AT2G39310 |
| RefSeq:AT2G39310-TAIR-G | EnsemblPlants:AT2G39310.4 | EMBL:AY054159 | EMBL:AY069884 | EMBL:AY142009 | Unigene:At.12818 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | Symbol:JAL22 |
| InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001078021.1 | RefSeq:NP_001154564.1 | RefSeq:NP_001323620.1 |
| RefSeq:NP_181463.1 | UniProt:O80950 | PFAM:PF01419 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 |
| SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI0000000D6D | : | : | : |
Description
JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
Coordinates
chr2:-:16414034..16416736
Molecular Weight (calculated)
50465.6 Da
IEP (calculated)
4.932
GRAVY (calculated)
-0.355
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.