Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G35950.1 | Thale cress | cytosol | 82.88 | 82.88 |
| AT1G52100.1 | Thale cress | cytosol | 68.47 | 69.57 |
| CDY02548 | Canola | cytosol | 60.36 | 61.61 |
| AT2G25980.1 | Thale cress | cytosol | 58.33 | 57.68 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 27.25 | 54.75 |
| AT3G16430.2 | Thale cress | cytosol | 36.26 | 54.39 |
| AT3G16420.1 | Thale cress | cytosol | 35.59 | 53.02 |
| AT3G16450.2 | Thale cress | cytosol | 34.68 | 51.33 |
| AT3G16440.2 | Thale cress | cytosol | 34.91 | 47.99 |
| AT5G28520.1 | Thale cress | cytosol | 47.97 | 47.02 |
| AT1G52050.1 | Thale cress | extracellular | 31.08 | 44.09 |
| AT1G52060.1 | Thale cress | extracellular | 30.41 | 42.99 |
| AT1G52070.1 | Thale cress | extracellular | 30.18 | 42.54 |
| AT1G61230.1 | Thale cress | cytosol | 46.17 | 40.59 |
| AT2G39310.4 | Thale cress | cytosol | 40.77 | 39.52 |
| AT1G60095.1 | Thale cress | cytosol | 51.58 | 38.1 |
| AT1G57570.1 | Thale cress | mitochondrion | 52.25 | 37.78 |
| AT3G16470.1 | Thale cress | cytosol | 38.29 | 37.69 |
| AT1G60110.2 | Thale cress | cytosol | 52.7 | 37.62 |
| AT1G60130.1 | Thale cress | cytosol | 50.0 | 37.0 |
| AT5G49870.1 | Thale cress | cytosol | 50.0 | 36.94 |
| AT5G49850.1 | Thale cress | cytosol | 49.55 | 36.91 |
| AT3G21380.1 | Thale cress | cytosol | 37.39 | 36.09 |
| AT1G52120.2 | Thale cress | cytosol | 37.16 | 35.95 |
| AT2G39330.2 | Thale cress | cytosol | 40.99 | 35.9 |
| AT1G52110.1 | Thale cress | mitochondrion | 48.87 | 35.28 |
| AT5G38550.1 | Thale cress | cytosol | 47.07 | 35.19 |
| AT1G52130.1 | Thale cress | cytosol | 34.91 | 32.09 |
| AT5G46000.1 | Thale cress | cytosol | 28.6 | 32.07 |
| AT1G33790.2 | Thale cress | cytosol | 52.93 | 31.54 |
| AT1G73040.1 | Thale cress | cytosol | 12.39 | 31.25 |
| AT5G38540.1 | Thale cress | cytosol | 31.76 | 30.13 |
| AT3G16460.1 | Thale cress | cytosol | 46.4 | 29.22 |
| AT1G52030.2 | Thale cress | cytosol | 39.19 | 27.1 |
| AT1G52040.1 | Thale cress | cytosol | 26.13 | 25.11 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 8.11 | 24.16 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 30.63 | 22.63 |
| AT1G52000.2 | Thale cress | cytosol | 31.98 | 19.45 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:833584 | ProteinID:AED94030.1 | ArrayExpress:AT5G35940 | EnsemblPlantsGene:AT5G35940 |
| RefSeq:AT5G35940 | TAIR:AT5G35940 | RefSeq:AT5G35940-TAIR-G | EnsemblPlants:AT5G35940.1 | TAIR:AT5G35940.1 | Unigene:At.43336 |
| ProteinID:BAB09250.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0009506 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001318679.1 |
| PFAM:PF01419 | PO:PO:0009005 | PO:PO:0020100 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 |
| UniProt:Q9FGC5 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI000009CD61 | SEG:seg | : |
Description
JAL41Jacalin-related lectin 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGC5]
Coordinates
chr5:+:14090574..14093007
Molecular Weight (calculated)
48517.5 Da
IEP (calculated)
6.953
GRAVY (calculated)
-0.316
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MALMVNAKGG NGGKEWDDGF DYEGVTKIHV RAGSEGIQFI KFDYVKVGKT IDGPIHGVSG LGMTQTFEIN HLQKEYLVSI EGYYDKSTGV IQSIQFKTNV
101: KTSDMMGFNK GTKFSLGIIR NKIIGFHGFS DKNVYSLGAY FIKVLATKSG MQGGQNTGKS YDYGGDYDGI RKVYVTYDGT SIRHMRVDYD KAGQVECYEY
201: GDKTGTQYKI TVNYPYECIT SVEGSYANTQ PYGCIVLRSL TFKTSNGRTL VIGTVTGTKF LLESKGNAIV GFHGRVGSCV DSIGAYYAPF SPSPPPTQKL
301: EGQGGDGGDS WDDGAFLNVK KVYIGQGSNG IVAVKFEYEN DASEVVVGDE HGKTTLLGYE VFELDYPNEY ITSLEGCHDK VMGAETGVIT MLRFKTNKRT
401: SPPFGLEAGV NFVLQKESHK ITGFHGKSST MLHQIGVHVV PITE
101: KTSDMMGFNK GTKFSLGIIR NKIIGFHGFS DKNVYSLGAY FIKVLATKSG MQGGQNTGKS YDYGGDYDGI RKVYVTYDGT SIRHMRVDYD KAGQVECYEY
201: GDKTGTQYKI TVNYPYECIT SVEGSYANTQ PYGCIVLRSL TFKTSNGRTL VIGTVTGTKF LLESKGNAIV GFHGRVGSCV DSIGAYYAPF SPSPPPTQKL
301: EGQGGDGGDS WDDGAFLNVK KVYIGQGSNG IVAVKFEYEN DASEVVVGDE HGKTTLLGYE VFELDYPNEY ITSLEGCHDK VMGAETGVIT MLRFKTNKRT
401: SPPFGLEAGV NFVLQKESHK ITGFHGKSST MLHQIGVHVV PITE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.