Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34134 | Canola | cytosol | 46.22 | 79.33 |
| CDY60590 | Canola | cytosol | 73.39 | 44.79 |
| CDY69096 | Canola | cytosol | 73.11 | 44.62 |
| AT1G52130.1 | Thale cress | cytosol | 45.38 | 33.54 |
| CDY40959 | Canola | cytosol | 44.54 | 31.18 |
| AT5G49850.1 | Thale cress | cytosol | 47.34 | 28.36 |
| CDY43090 | Canola | cytosol | 21.85 | 28.16 |
| AT5G49870.1 | Thale cress | cytosol | 47.06 | 27.95 |
| AT1G60130.1 | Thale cress | cytosol | 46.78 | 27.83 |
| AT1G60095.1 | Thale cress | cytosol | 44.82 | 26.62 |
| AT1G52110.1 | Thale cress | mitochondrion | 43.98 | 25.53 |
| AT1G60110.2 | Thale cress | cytosol | 44.26 | 25.4 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 13.73 | 22.58 |
| CDY43910 | Canola | cytosol | 41.74 | 20.08 |
| CDY13177 | Canola | extracellular | 17.65 | 19.94 |
| CDX75882 | Canola | cytosol | 14.01 | 17.48 |
| CDX82402 | Canola | cytosol, plasma membrane | 13.73 | 16.5 |
| CDY65744 | Canola | peroxisome | 12.89 | 16.2 |
| CDY02548 | Canola | cytosol | 19.05 | 15.63 |
| CDY20197 | Canola | cytosol | 8.96 | 15.53 |
| CDY06999 | Canola | cytosol | 13.73 | 15.41 |
| CDY28360 | Canola | cytosol | 7.0 | 14.71 |
| CDX82401 | Canola | cytosol | 10.92 | 14.66 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 9.24 | 14.35 |
| CDX82115 | Canola | extracellular | 9.52 | 13.6 |
| CDX92074 | Canola | cytosol | 23.81 | 13.08 |
| CDY43099 | Canola | cytosol | 24.37 | 12.85 |
| CDY53442 | Canola | cytosol | 13.45 | 12.15 |
| CDY46535 | Canola | cytosol | 12.89 | 11.95 |
| CDY07657 | Canola | cytosol | 14.85 | 11.67 |
| CDX93273 | Canola | cytosol | 14.85 | 11.62 |
| CDY06997 | Canola | cytosol | 14.57 | 11.61 |
| CDY22879 | Canola | cytosol | 14.01 | 11.55 |
| CDY24969 | Canola | cytosol | 14.57 | 11.45 |
| CDX74856 | Canola | cytosol | 14.57 | 11.3 |
| CDX93275 | Canola | cytosol | 14.01 | 11.16 |
| CDY07000 | Canola | cytosol | 13.17 | 10.63 |
| CDY20195 | Canola | cytosol | 11.76 | 9.91 |
| CDY59365 | Canola | cytosol | 21.57 | 9.65 |
| CDY38589 | Canola | cytosol | 12.04 | 9.39 |
| CDY32783 | Canola | cytosol | 13.73 | 9.37 |
| CDX90860 | Canola | cytosol | 10.08 | 9.33 |
| CDY47758 | Canola | cytosol | 13.73 | 9.23 |
| CDY70857 | Canola | cytosol | 9.8 | 8.35 |
| CDY59556 | Canola | cytosol | 10.36 | 8.28 |
| CDX87871 | Canola | cytosol | 21.29 | 8.27 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 5.04 | 8.14 |
| CDX82963 | Canola | cytosol | 9.52 | 8.11 |
| CDY22878 | Canola | cytosol | 21.85 | 7.94 |
| CDY45301 | Canola | cytosol | 6.44 | 7.85 |
| CDY53520 | Canola | cytosol | 6.44 | 7.85 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 10.92 | 6.93 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 6.72 | 6.65 |
| CDX96652 | Canola | extracellular | 11.2 | 6.5 |
| CDY63700 | Canola | cytosol | 10.64 | 6.5 |
| CDY47825 | Canola | cytosol | 13.73 | 6.18 |
| CDY51197 | Canola | cytosol | 14.85 | 5.9 |
| CDX93274 | Canola | cytosol | 3.64 | 5.78 |
| CDY51196 | Canola | cytosol | 14.85 | 5.7 |
| CDY02564 | Canola | cytosol | 14.85 | 5.66 |
| CDY02563 | Canola | cytosol, extracellular | 14.85 | 5.0 |
| CDY51195 | Canola | cytosol, extracellular | 14.85 | 4.98 |
| CDY45640 | Canola | cytosol | 3.64 | 4.23 |
| CDY72239 | Canola | cytosol | 3.36 | 3.86 |
| CDY70821 | Canola | cytosol | 3.64 | 2.9 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 1.12 | 2.68 |
| CDY21999 | Canola | extracellular | 1.12 | 2.31 |
| CDY68611 | Canola | cytosol | 1.68 | 2.26 |
| CDX77840 | Canola | cytosol | 0.56 | 2.11 |
| CDX79175 | Canola | cytosol | 1.68 | 1.97 |
| CDY06998 | Canola | cytosol | 0.84 | 1.44 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 0.84 | 1.44 |
| CDY54394 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY47824 | EnsemblPlantsGene:GSBRNA2T00088286001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDY47824 | ProteinID:CDY47824.1 | SMART:SM00915 |
| SUPFAM:SSF51101 | UniParc:UPI0004EEF88E | UniProt:A0A078IEN9 | MapMan:35.1 | : | : |
Description
BnaC06g05190DBnaC06g05190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEN9]
Coordinates
chrLK032739:+:81836..86502
Molecular Weight (calculated)
40788.2 Da
IEP (calculated)
9.728
GRAVY (calculated)
-0.714
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQRLEAEGS KNGRYIWDDG FNHDDVTKIY VRGGSDGIQF IRFDYIMKGQ LNNGSFHGQS YKGFTQTFEI NHLKHEHLES VNGYYTKSTG VQALQFKTNL
101: RISELMEYDD KGTKFTLAVH EKKITGFQGS KQSNIYSLGA YFTWITPTRM EAKGGNGGKE WDDGSDHEEG VTKIHVRGGR KGIQYIKFEY VKDGQLKDGP
201: VHGSISGGGF EPVVYVQGFE ERCDSLRRRR LHLSWNRGHR DELGWKRVAR GVTGIRVARG VTGITFGRWW MAIRRETTQN VREKMEIIMF EIRHVDQECL
301: VSVEGNYDVQ FKTNSNTSKR MGYNKGRISQ KFGNEQRFGD LGILFESKGC ALVGFHG
101: RISELMEYDD KGTKFTLAVH EKKITGFQGS KQSNIYSLGA YFTWITPTRM EAKGGNGGKE WDDGSDHEEG VTKIHVRGGR KGIQYIKFEY VKDGQLKDGP
201: VHGSISGGGF EPVVYVQGFE ERCDSLRRRR LHLSWNRGHR DELGWKRVAR GVTGIRVARG VTGITFGRWW MAIRRETTQN VREKMEIIMF EIRHVDQECL
301: VSVEGNYDVQ FKTNSNTSKR MGYNKGRISQ KFGNEQRFGD LGILFESKGC ALVGFHG
001: MTQRLEAQGQ KTLDSPFVWD DGSDHDDVTK IHVRGDSRGI NCIRFDYIKS GQRKYKSFYG PSWAGFTQTF KINHKEDEQL ESVEGFYKPD SRTIVGLQFK
101: TNLRISELIG HGKKDDTKFS LAVDGKKIIG FHGCSGSYLE SLGAYFTCIA PTRMEAKGAK GGTDWNDGAD HEGVAKIYVR GGRDCIQYIK FDYVKDRKYI
201: YGPAHGVRGR GFTESFEINH LDNEYMVSVE GYYDEGDSGI IQGIQFRTNI KTSELIGYNN GKKFSLAANG KKIIGFHGYA DQNLNSLGAY FTTSPFIKLE
301: SRESTGDLWD DGTFEGVRKV CIHKQPVLYS VIQFEYVNRG EVENRDLGLR VFIAEEGEFV VNYPYEFIIS VEGTFTNEKD PHVASLTFKT SKGRTSSTFG
401: TPGTKKFVLQ SKGCGVVGFH GVLSNDYISG LGAYFRLLPP LPDGEKVEAK GGDGGASWDD GGFDCIRKIY IGHGEMGIAF VKFLYDKDNK FVVGDDHGSK
501: TLLGVDEFEL EHPDEYLISV EGSYDVVDGS ESEVILMLRF KTNMRTSQVF GLDTTSSFIL EKECHKIVGF HGKIGKMLHQ IGVHVLPIID
101: TNLRISELIG HGKKDDTKFS LAVDGKKIIG FHGCSGSYLE SLGAYFTCIA PTRMEAKGAK GGTDWNDGAD HEGVAKIYVR GGRDCIQYIK FDYVKDRKYI
201: YGPAHGVRGR GFTESFEINH LDNEYMVSVE GYYDEGDSGI IQGIQFRTNI KTSELIGYNN GKKFSLAANG KKIIGFHGYA DQNLNSLGAY FTTSPFIKLE
301: SRESTGDLWD DGTFEGVRKV CIHKQPVLYS VIQFEYVNRG EVENRDLGLR VFIAEEGEFV VNYPYEFIIS VEGTFTNEKD PHVASLTFKT SKGRTSSTFG
401: TPGTKKFVLQ SKGCGVVGFH GVLSNDYISG LGAYFRLLPP LPDGEKVEAK GGDGGASWDD GGFDCIRKIY IGHGEMGIAF VKFLYDKDNK FVVGDDHGSK
501: TLLGVDEFEL EHPDEYLISV EGSYDVVDGS ESEVILMLRF KTNMRTSQVF GLDTTSSFIL EKECHKIVGF HGKIGKMLHQ IGVHVLPIID
Arabidopsis Description
JAL18Jacalin-related lectin 18 [Source:UniProtKB/Swiss-Prot;Acc:O80737]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.