CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014231.1-P	Field mustard	cytosol	99.37	75.74
CDY43090	Canola	cytosol	19.92	57.4
CDY28362	Canola	cytosol, nucleus, plastid	13.53	49.77
CDX92074	Canola	cytosol	38.47	47.23
CDX82402	Canola	cytosol, plasma membrane	17.29	46.46
CDX82401	Canola	cytosol	14.79	44.36
CDY43099	Canola	cytosol	37.47	44.17
CDY54394	Canola	cytosol	5.14	41.0
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	10.4	39.71
CDX75882	Canola	cytosol	14.16	39.51
CDX93274	Canola	cytosol	11.03	39.11
CDY06998	Canola	cytosol	9.9	37.98
CDX90860	Canola	cytosol	18.3	37.82
CDY21999	Canola	extracellular	8.02	36.99
CDY24969	Canola	cytosol	20.43	35.9
CDY07657	Canola	cytosol	20.3	35.68
CDX74856	Canola	cytosol	20.43	35.43
CDX93273	Canola	cytosol	20.18	35.31
CDY07000	Canola	cytosol	19.55	35.29
CDY06997	Canola	cytosol	19.55	34.82
CDY13177	Canola	extracellular	13.66	34.49
CDY20197	Canola	cytosol	8.9	34.47
CDY53520	Canola	cytosol	12.53	34.13
CDX93275	Canola	cytosol	19.05	33.93
CDY45301	Canola	cytosol	12.41	33.79
CDY69096	Canola	cytosol	24.44	33.33
CDY38589	Canola	cytosol	19.05	33.19
CDY60590	Canola	cytosol	24.31	33.16
CDY59556	Canola	cytosol	18.55	33.11
CDY02548	Canola	cytosol	17.92	32.87
CDX77840	Canola	cytosol	3.88	32.63
CDY20195	Canola	cytosol	16.79	31.6
CDY72239	Canola	cytosol	12.16	31.19
CDY28360	Canola	cytosol	6.64	31.18
CDY45640	Canola	cytosol	11.9	30.94
CDY44637	Canola	cytosol, mitochondrion, plastid	13.91	30.75
CDY40959	Canola	cytosol	19.42	30.39
CDY65744	Canola	peroxisome	10.78	30.28
CDY22879	Canola	cytosol	16.04	29.56
CDY06999	Canola	cytosol	11.78	29.56
CDY70821	Canola	cytosol	15.54	27.68
CDY43910	Canola	cytosol	25.56	27.49
CDX79175	Canola	cytosol	10.15	26.64
CDY70857	Canola	cytosol	13.66	26.01
CDX82963	Canola	cytosol	13.53	25.78
CDY68611	Canola	cytosol	8.52	25.66
CDY32783	Canola	cytosol	16.42	25.05
CDY22878	Canola	cytosol	30.7	24.95
CDY47758	Canola	cytosol	16.29	24.48
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	16.92	23.98
CDX87871	Canola	cytosol	27.57	23.94
CDY46535	Canola	cytosol	11.15	23.12
CDY53442	Canola	cytosol	11.28	22.78
CDY63700	Canola	cytosol	16.04	21.88
CDY48032	Canola	cytosol, extracellular, nucleus	6.27	21.74
CDY47824	Canola	cytosol	9.65	21.57
CDX96652	Canola	extracellular	16.29	21.14
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	3.88	20.81
CDX82115	Canola	extracellular	6.27	20.0
CDY34134	Canola	cytosol	4.76	18.27
CDY51196	Canola	cytosol	20.05	17.2
CDY02564	Canola	cytosol	19.8	16.88
CDY51197	Canola	cytosol	18.92	16.82
CDY51195	Canola	cytosol, extracellular	20.05	15.04
CDY02563	Canola	cytosol, extracellular	19.67	14.81
CDY47825	Canola	cytosol	13.16	13.24

Protein Annotations

EnsemblPlants:CDY59365	EnsemblPlantsGene:GSBRNA2T00026004001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PFAM:PF01419
PFscan:PS51752	ProteinID:CDY59365	ProteinID:CDY59365.1	SEG:seg	SMART:SM00915	SUPFAM:SSF51101
UniParc:UPI0004EF3ACD	UniProt:A0A078J7J8	MapMan:35.1	:	:	:

Description

BnaA08g29580DBnaA08g29580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7J8]

Coordinates

chrLK033755:-:593..8339

Molecular Weight (calculated)

86034.2 Da

IEP (calculated)

6.742

GRAVY (calculated)

-0.239

Length

798 amino acids

Sequence
(BLAST)

001: MSWDDGTARK VKKVHITYDD VIYSVQVTYG TALQAPRRGS VGPMSVEFTL ESDEYITALS GYALSTQDVV TSLTFTTNKK TYGPYGNKFG YQISAPEKTG
101: KQIAGFHGTK DNILNSIDVH YAPIPTGTGG SETGSGIQKL PGEGLVGGTA WDDGSDHDGV TNIYVASTLL GIKNVMFGYM KDGQSKQGGH HGGDPTKQEI
201: VINHPDEHLV SVEGWYESSS KFIMGIQFKT NYKICASMGY RYEGGNDYKF THQVQDKKII GFHGFASNHL NSIGAYFAPL SSTTTLPIGT GGSGAQKLGA
301: QGVTGGSAWD DGSYHDGVTK IVVRTCTLGV QFVNFFYDND IGAVHGAPGD PTGSTQHIVI NHPDEHLVSI EGWYISNYIS GIRFKTNQKT SVYIGYEYTG
401: SGTIFTLQVK DKKIIGFHGF ASDHLNSIGA YFVPVLSTPT LPIVLPKRFG AVWDDGTHDK VKKIFIGLGQ DVIASVKFEY INGSGVVNGV EHGTPTLLGF
501: EEFTLELGLD EYITALSAYV ETLSTRDVVT SLTFTTNKKN YGPYGNKSGF QIFSPGETGK QIAGFHGTSG NVLNSISGYY APIPTYKLVA VGGTGGSAWD
601: DGSDHDGVTK ITVRTGGVGV QYVKFDYVKA GQPKQGTLHG VHGSRGSTRE IVINHPDEHL VSVEGWYDSS NVILGIQFKT NLKTSDYLGY EFEGTGTKFT
701: LQVKDKKIIG FHGFASDHLN SIGAYFVLLP STTLNPIVPP KKLGAVWDDR THDKVKKVFV GLGQDGIASV KFEYINGSGV VNGVEHGTPT LLGFEEVR

Best Arabidopsis Sequence Match ( AT1G60095.1 )
(BLAST)

001: MSQDSNMFER LEAQGKIDSS SDYKWDDGSE HDDVTKIYVS FGKECIRNIR FDYIKSGQPK YGSFHGPTFQ GLLQTFEIDH KKDEQLVSVE GYCKPGSDLI
101: QGVQFKTNLR ISEIIGFEKA IFGNPTTFSL AEDGKKIIGF HGYSMANLNS LGAYFTWISP TKMEAKGGKG GTEWNDGAEH EGFTKIYVQG GCDGIQYIKF
201: DYVKDGQHKY GSPHGVKGSE STEPFEINHL DKEYLISVEG YYDEGDSGVI QGIQFKTNIK TSELIGDKKG RKFSLAANGK KIIGFHGYAD KNLNSLGAYF
301: TTSPLISLEH TTGSDLVNHI WDDGSFEGVR KVYVRYDSLE ICYVEFDYDN KGKVEKREHG MFYSWVQQGE FVVDYPNEFI TSVEGTMRTE SFMQVASLTF
401: KTSKGRTSST FGSPSDSKFL LESKGCGVVG FYGRCFSSIF DLGAYFRPLP PPSNTEKVEA KGGDGGASWD DGGFDGIRNI YIGHNKMGIA FVKFLYDKDS
501: QIVVGDDHGS NTLLRVDEFE LEHPGEYLIS VEGSYDVVDG SESEVIRMLR FKTNLRTSQL FGHETTPSFI LEKECHKIVG FHGKIGKMLH QIGVNVLPIT
601: D

Arabidopsis Description

Mannose-binding lectin superfamily protein [Source:TAIR;Acc:AT1G60095]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.