Factsheet for Bra030402.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87871	Canola	cytosol	82.26	95.87
CDY72239	Canola	cytosol	27.64	95.18
Bra018940.1-P	Field mustard	cytosol	60.32	54.79
Bra018941.1-P	Field mustard	cytosol	19.7	48.73
Bra018942.1-P	Field mustard	cytosol	16.34	46.05
Bra022160.1-P	Field mustard	cytosol	25.49	40.5
Bra000129.1-P	Field mustard	cytosol	17.09	40.31
Bra017083.1-P	Field mustard	cytosol	13.63	40.0
Bra021176.1-P	Field mustard	cytosol	16.81	38.54
Bra005053.1-P	Field mustard	cytosol	15.87	37.2
Bra022161.1-P	Field mustard	cytosol	15.5	36.89
Bra017082.1-P	Field mustard	cytosol	14.94	36.2
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	6.26	35.83
Bra014306.1-P	Field mustard	cytosol	13.63	35.61
Bra001631.1-P	Field mustard	cytosol	9.43	34.01
Bra001632.1-P	Field mustard	cytosol	7.66	33.61
Bra021179.1-P	Field mustard	cytosol	14.01	33.19
Bra021177.1-P	Field mustard	nucleus	8.96	32.21
Bra017017.1-P	Field mustard	cytosol	10.18	31.87
Bra018945.1-P	Field mustard	cytosol	14.85	30.17
Bra026177.1-P	Field mustard	cytosol	8.22	30.03
Bra013637.1-P	Field mustard	cytosol	13.07	29.91
Bra023885.1-P	Field mustard	nucleus	14.66	29.07
Bra027095.1-P	Field mustard	cytosol	15.87	28.91
Bra013639.1-P	Field mustard	cytosol	12.98	28.9
Bra030443.1-P	Field mustard	cytosol	19.51	28.17
Bra014308.1-P	Field mustard	cytosol	18.67	27.29
Bra008068.1-P	Field mustard	cytosol	4.2	25.57
Bra016496.1-P	Field mustard	cytosol	12.7	23.33
Bra014309.1-P	Field mustard	cytosol	18.21	22.83
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	3.08	22.15
Bra025760.1-P	Field mustard	extracellular	12.51	22.08
Bra014231.1-P	Field mustard	cytosol	21.1	21.59
Bra002818.1-P	Field mustard	cytosol	16.81	21.03
Bra014307.1-P	Field mustard	cytosol	16.15	19.77

Protein Annotations

EnsemblPlants:Bra030402.1	EnsemblPlants:Bra030402.1-P	EnsemblPlantsGene:Bra030402	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0002547902
UniProt:M4ENN2	MapMan:35.1	:	:	:	:

Description

AT1G52000 (E=3e-112) | jacalin lectin family protein

Coordinates

chrA05:+:10889606..10894278

Molecular Weight (calculated)

109339.0 Da

IEP (calculated)

6.061

GRAVY (calculated)

-0.670

Length

1071 amino acids

Sequence
(BLAST)

0001: MSWDDGTHAK VNRVQLTFDD VIRSIEVEYE GTNVQPQRRG TVGTNSDEFT LSSDEFITRV SGYYRTTFSG DVITALLFRT NKKTYGPYGN LTRNFFSADA
0101: PRNNQIAGFL GNSGSALNSI NVHFAPIPPP GSIKPKPAGP GTGDAGSGQP VSPGPGDAGG GPKPGGPGTG ENGAGTKPSG PGTGENGAGT KPSGPGTGEN
0201: GAGTKPSGPG TGENGAGTKP SGPGTGENGA GTKPSGPGTG ENGAGTKPSG PGTGENGAGT KPSGPGTGEN GAGTKPSGPG TGENGAGTKP SGPGTGENGA
0301: GTKPSGPGTG ENGAGTKPSG PGTGENGAGT KPSGPGTGEN GAGTKPSGPG TGENGAGTKP GDLGTGADGE GTKPGGSGTG EDGAGTKPGG LETGEDGAGT
0401: KPVGSGTGND GGGPRPVIPG KMGPLGGDKG NEFDDVGFDG VKKITVGADE FSITYIKIEY SKDGKVEIRE HGTSRGQLKE FSVDYPNDNI VAVGGSYNHI
0501: FTYDTTLITS LYFTTSRGFT SPLFGEKTGT DFEFQGENRG KLLGFHGRAG FAIDAIGAYF HTGSQGGQGG GPRPVVPGKM GPLGGAKGNE FDDVGFDGVK
0601: KVTVGADEFS VTYLKIEYIK DGKVEIREHG TNRGQLKEFS VDYPNDNIVA VGGSYNHIFT YDTTLITSLY FTTSRGFTSP LFGEKKGTDF EFQGENRGKL
0701: LGFHGRAGYA IDAIGAYFHT GSQGGEGGGP KPVVPVKMGP LGGDRGNEFN DVGFDGVKKV AVAADEFSVT YIKIEYVKDG KVEIREHGTS RGQVKEFSVD
0801: HPNDNFTAVG GSYDHIFTYD TTLITSLYLT TSRGFTSPLF GEMKGTEFEF KGENGGKLIG FHGRAGHAID AIGAYFDTGS KPGGDSNSGK GTDSGSSTKD
0901: SGKGTDSGSS TKYSGKGSDS GSSTQRLEAQ GGKGGNQWDD GGDYDGVTKI HVAVGRWIEE ISFEYVKNGQ TKKGPARGVR GRRSTIGTFE ISHPNEYLIS
1001: VKGWSDSSNK IAGIQFKTNT KTSKYYGFEK IPGDESTDIL LEVKDKKIVG FHGFADSHVN ALGAYIAPAA N

Best Arabidopsis Sequence Match ( AT1G52000.2 )
(BLAST)

001: MSWDDGKHTK VKRVQLTFDD VIRSIEVEYD GTSLKSQPRG TAGTKIDGFT LSSDEYITEV NGYYKTTFSG EVITSLTFKT NKRTYGTYGN KTSSYFSVAA
101: PKDNQIVGFL GSSSHALNSI DAHFAPAPPP GSTGAKPGAS GIGSDSGSIG SAGTNPGADG TRETEKNAGG SKPSSGSAGT NPGASAVGNG ETEKNAGGSK
201: PSSGSAGTNP GASAGGNGET EKNVGGSKPS SGKAGTNPGA NAGGNGGTEK NAGGSKSSSG SARTNPGASA GGNGETVSNI GDTESNAGGS KSNDGANNGA
301: SGIESNAGST GTNFGAGGTG GIGDTESDAG GSKTNSGNGG TNDGASGIGS NDGSTGTNPG AGGGTDSNIE GTENNVGGKE TNPGASGIGN SDGSTGTSPE
401: GTESNADGTK TNTGGKESNT GSESNTNSSP QKLEAQGGNG GNQWDDGTDH DGVMKIHVAV GGLGIEQIRF DYVKNGQLKE GPFHGVKGRG GTSTIEISHP
501: DEYLVSVEGL YDSSNIIQGI QFQSNKHTSQ YFGYEYYGDG TQFSLQVNEK KIIGFHGFAD SHLNSLGAYF VPISSSSSSL TPPPNKVKAQ GGSYGETFDD
601: GAFDHVRKVY VGQGDSGVAY VKFDYEKDGK KETQEHGKMT LSGTEEFEVD SDDYITSMEV YVDKVYGYKS EIVIALTFKT FKGETSPRFG IETENKYEVK
701: DGKGGKLAGF HGKASDVLYA IGAYFIPAAN

Arabidopsis Description

JAL5Jacalin-related lectin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU23]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.