Factsheet for TraesCS3D01G029200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G028700.1	Wheat	cytosol	59.57	99.29
TraesCS3B01G052500.1	Wheat	cytosol	55.74	92.91
TraesCS3B01G053100.1	Wheat	cytosol, plastid	66.38	80.0
TraesCS7D01G254500.1	Wheat	cytosol	35.74	54.19
HORVU7Hr1G109850.2	Barley	cytosol	34.89	51.25
GSMUA_Achr4P29370_001	Banana	cytosol	20.43	48.48
TraesCS3D01G030000.1	Wheat	cytosol	29.36	41.57
TraesCS1D01G367900.1	Wheat	cytosol	37.45	27.5
TraesCS1D01G368600.1	Wheat	mitochondrion	22.98	24.55
PGSC0003DMT400044313	Potato	cytosol	20.43	15.84
PGSC0003DMT400009575	Potato	cytosol	18.3	13.11
Solyc04g080420.2.1	Tomato	cytosol, nucleus	17.45	12.06
PGSC0003DMT400009447	Potato	cytosol, mitochondrion, plastid	12.34	10.98
Solyc04g080410.1.1	Tomato	cytosol	14.04	10.68
TraesCS1D01G327100.1	Wheat	cytosol	20.85	8.35
TraesCS3D01G310300.1	Wheat	plastid	8.94	4.66

Protein Annotations

EnsemblPlants:TraesCS3D01G029200.1	EnsemblPlantsGene:TraesCS3D01G029200	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	ncoils:Coil
PANTHER:PTHR45172	PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101
TIGR:cd09612	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:10566516..10567494

Molecular Weight (calculated)

24658.5 Da

IEP (calculated)

7.705

GRAVY (calculated)

-0.253

Length

235 amino acids

Sequence
(BLAST)

001: MEKAGSKVTV KVEEPNLEGH GGGSNSAAPG GGSTAVLPLQ QGALLPADRF AVVLPDISLG APATITVSIG DHRSEAKAAE DKLQKVKAKG HVLKMGPCGG
101: PRGDAWKMDV RGGDRIVKVI LWHAGAVDAI SVSYERDGRI EQTEHWGKLE GRQRSEICLE PDEYLTGMKG HVGEFGGSFL VGALTLVGNR RSFGPYGTRK
201: GPPFELPAVG GRIVGFHGRS GGLIDALGIY VETDN

Best Arabidopsis Sequence Match ( AT1G73040.1 )
(BLAST)

001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA

Arabidopsis Description

JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.