Factsheet for TraesCS3B01G165200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G131600.1	Wheat	cytosol	51.38	80.54
TraesCS3B01G052500.1	Wheat	cytosol	35.17	72.34
TraesCS6B01G135000.1	Wheat	cytosol	32.41	64.38
TraesCS3B01G031800.1	Wheat	cytosol, plastid	51.72	61.98
TraesCS7B01G152700.1	Wheat	cytosol	31.72	59.35
TraesCS3B01G053100.1	Wheat	cytosol, plastid	34.48	51.28
TraesCS3B01G032600.1	Wheat	cytosol	25.86	50.68
HORVU7Hr1G109850.2	Barley	cytosol	27.93	50.62
GSMUA_Achr4P29370_001	Banana	cytosol	16.55	48.48
TraesCS1B01G380700.1	Wheat	mitochondrion	18.97	25.0
PGSC0003DMT400044313	Potato	cytosol	19.31	18.48
PGSC0003DMT400009575	Potato	cytosol	16.21	14.33
Solyc04g080420.2.1	Tomato	cytosol, nucleus	14.48	12.35
PGSC0003DMT400009447	Potato	cytosol, mitochondrion, plastid	11.03	12.12
Solyc04g080410.1.1	Tomato	cytosol	11.38	10.68
TraesCS1B01G338600.1	Wheat	cytosol	16.9	8.09
TraesCS3B01G344800.1	Wheat	plastid	6.55	4.21

Protein Annotations

EnsemblPlants:TraesCS3B01G165200.1	EnsemblPlantsGene:TraesCS3B01G165200	Gene3D:2.100.10.30	Gene3D:3.30.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR013083	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant
InterPro:Jacalin-like_lectin_dom_sf	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR45172	PFAM:PF01419	PFscan:PS51752	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	TIGR:cd09612	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3B:+:163294938..163296132

Molecular Weight (calculated)

31392.7 Da

IEP (calculated)

8.061

GRAVY (calculated)

-0.252

Length

290 amino acids

Sequence
(BLAST)

001: MHPMEKTPTN TNTINKTELQ HDHSGNSSAA PTVIAVEVDP DALGCPTCLQ PLVPPVFQCA AGHLVCSTCH GNLSDKNKCT SCFIKTGFSR CFVPTSYSRC
101: HGVDRILQSV RVACPYRCSA VKTFYHDKEE HERTCPGKAG AVRKRGRVLK MGPCGGGGGD VWEMDLRGVN RIVKVVLWHS GAVDAILVLY ERDGREEQTK
201: HWGKLEGHRS EICLEPGEYL VGVKGNLGNF GGCFLLGTLT FISNLRTFGP YGTREGPPFD LPAAGGKIVG FHGRSGGLLD ALGTYVKMDD

Best Arabidopsis Sequence Match ( AT1G73040.1 )
(BLAST)

001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA

Arabidopsis Description

JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.