Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G064790.1 | Barley | nucleus | 60.34 | 41.18 |
| HORVU7Hr1G064820.1 | Barley | nucleus | 60.34 | 41.18 |
| HORVU2Hr1G066940.1 | Barley | nucleus | 51.72 | 36.14 |
| HORVU4Hr1G081230.2 | Barley | nucleus | 60.34 | 33.65 |
| HORVU1Hr1G048890.1 | Barley | nucleus | 63.79 | 19.47 |
| HORVU1Hr1G080060.11 | Barley | nucleus, plastid | 98.28 | 13.84 |
| HORVU2Hr1G033000.1 | Barley | cytosol | 51.72 | 12.35 |
| HORVU6Hr1G051930.1 | Barley | nucleus | 13.79 | 3.16 |
| HORVU1Hr1G018340.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU7Hr1G111180.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G078730.1 | EnsemblPlantsGene:HORVU1Hr1G078730 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:NAP-like_sf | InterPro:NAP_family |
| PANTHER:PTHR11875 | PANTHER:PTHR11875:SF98 | PFAM:PF00956 | SEG:seg | SUPFAM:SSF143113 | UniParc:UPI000B4630B1 |
| UniProt:A0A287GDS0 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:520981169..520981582
Molecular Weight (calculated)
6621.5 Da
IEP (calculated)
4.308
GRAVY (calculated)
-0.957
Length
58 amino acids
Sequence
(BLAST)
(BLAST)
1: QSQHDEFEAK FFEERAALEA KYQKMYEPLY SKRHDVVNGV VEVEGVTKDD SGEAAADQ
001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ
Arabidopsis Description
NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.