Factsheet for HORVU1Hr1G048890.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G064820.1	Barley	nucleus	42.63	95.29
HORVU7Hr1G064790.1	Barley	nucleus	42.63	95.29
HORVU4Hr1G081230.2	Barley	nucleus	41.05	75.0
HORVU1Hr1G078730.1	Barley	nucleus	19.47	63.79
HORVU2Hr1G066940.1	Barley	nucleus	25.79	59.04
TraesCS7D01G096300.1	Wheat	nucleus	85.79	42.67
TraesCS4A01G401100.1	Wheat	nucleus	85.26	42.41
TraesCS7A01G102400.1	Wheat	nucleus	85.26	42.3
OQU75826	Sorghum	nucleus	82.11	40.94
Os06t0149400-01	Rice	nucleus	80.0	40.21
Zm00001d036177_P001	Maize	nucleus	77.37	40.05
Zm00001d045352_P002	Maize	extracellular, mitochondrion	79.47	39.74
GSMUA_Achr7P09020_001	Banana	nucleus	73.16	37.47
GSMUA_Achr6P00890_001	Banana	nucleus	71.05	36.49
PGSC0003DMT400006378	Potato	nucleus	46.32	35.06
KRH10020	Soybean	nucleus	66.32	34.43
KRH23302	Soybean	nucleus	60.0	34.23
Solyc03g121700.2.1	Tomato	nucleus	66.84	34.14
Bra027399.1-P	Field mustard	nucleus	49.47	34.06
CDX97517	Canola	nucleus	49.47	34.06
VIT_09s0002g02330.t01	Wine grape	nucleus	67.89	33.86
VIT_11s0016g02050.t01	Wine grape	nucleus	67.89	33.42
GSMUA_Achr2P16760_001	Banana	mitochondrion, nucleus	70.0	32.76
CDY23642	Canola	nucleus	50.0	32.31
GSMUA_Achr10P...	Banana	endoplasmic reticulum	71.05	31.76
TraesCS3A01G357000.1	Wheat	mitochondrion	40.53	31.17
HORVU1Hr1G080060.11	Barley	nucleus, plastid	66.32	30.58
AT3G13782.2	Thale cress	cytosol	50.0	29.97
HORVU6Hr1G051930.1	Barley	nucleus	23.68	17.79
HORVU2Hr1G033000.1	Barley	cytosol	19.47	15.23
HORVU7Hr1G111180.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G018340.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G048890.1	EnsemblPlantsGene:HORVU1Hr1G048890	Gene3D:3.30.1120.90	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf
InterPro:NAP_family	PANTHER:PTHR11875	PANTHER:PTHR11875:SF98	PFAM:PF00956	SEG:seg	SUPFAM:SSF143113
UniParc:UPI000B470D31	UniProt:A0A287FGU5	MapMan:12.2.6	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:363122145..363124110

Molecular Weight (calculated)

21858.8 Da

IEP (calculated)

4.938

GRAVY (calculated)

-0.798

Length

190 amino acids

Sequence
(BLAST)

001: MNGCDFKSRT GSLLDEIEGK FFEERVALEA KYQKLYEPLY AKRYNIVNGV VEVDGVAQEP TSENAAEGGD SDAKGIPDFW LTALKSNEVL SEEIQERDEP
101: ILKYLKDMKW SRIDDPKGFK LEFFFHANPF LKNSVQTKTY HMVDEDDPIL EKAIETEIEW YPGKNVTQKI LKKKPKKGSK NTKPITKTEE

Best Arabidopsis Sequence Match ( AT2G19480.1 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.