Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P09020_001 | Banana | nucleus | 77.88 | 89.22 |
| GSMUA_Achr6P00890_001 | Banana | nucleus | 71.29 | 81.89 |
| GSMUA_Achr2P16760_001 | Banana | mitochondrion, nucleus | 75.76 | 79.31 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 67.53 | 75.33 |
| Os06t0149400-01 | Rice | nucleus | 64.94 | 73.02 |
| Solyc03g121700.2.1 | Tomato | nucleus | 63.53 | 72.58 |
| PGSC0003DMT400006378 | Potato | nucleus | 42.59 | 72.11 |
| Zm00001d045352_P002 | Maize | extracellular, mitochondrion | 63.76 | 71.32 |
| OQU75826 | Sorghum | nucleus | 63.76 | 71.13 |
| HORVU1Hr1G048890.1 | Barley | nucleus | 31.76 | 71.05 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 64.24 | 70.73 |
| KRH23302 | Soybean | nucleus | 54.82 | 69.97 |
| TraesCS4A01G401100.1 | Wheat | nucleus | 62.82 | 69.9 |
| Zm00001d036177_P001 | Maize | nucleus | 60.24 | 69.75 |
| TraesCS7D01G096300.1 | Wheat | nucleus | 62.59 | 69.63 |
| TraesCS7A01G102400.1 | Wheat | nucleus | 62.59 | 69.45 |
| KRH10020 | Soybean | nucleus | 58.82 | 68.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.06 | 66.29 |
| CDX97517 | Canola | nucleus | 38.59 | 59.42 |
| Bra027399.1-P | Field mustard | nucleus | 38.35 | 59.06 |
| CDY23642 | Canola | nucleus | 40.47 | 58.5 |
| HORVU7Hr1G064820.1 | Barley | nucleus | 11.29 | 56.47 |
| HORVU7Hr1G064790.1 | Barley | nucleus | 11.29 | 56.47 |
| AT3G13782.2 | Thale cress | cytosol | 41.18 | 55.2 |
| HORVU2Hr1G066940.1 | Barley | nucleus | 9.88 | 50.6 |
| TraesCS3A01G357000.1 | Wheat | mitochondrion | 28.47 | 48.99 |
| HORVU4Hr1G081230.2 | Barley | nucleus | 11.53 | 47.12 |
| GSMUA_Achr10P... | Banana | nucleus | 17.88 | 29.57 |
| GSMUA_Achr6P10690_001 | Banana | nucleus | 17.41 | 29.02 |
| GSMUA_Achr4P00490_001 | Banana | cytosol | 16.71 | 27.73 |
| GSMUA_Achr7P21000_001 | Banana | cytosol | 16.0 | 26.98 |
| HORVU2Hr1G033000.1 | Barley | cytosol | 13.88 | 24.28 |
Protein Annotations
| MapMan:12.2.6 | Gene3D:3.30.1120.90 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:GSMUA_Achr10G28070_001 |
| EnsemblPlants:GSMUA_Achr10P28070_001 | EnsemblPlants:GSMUA_Achr10T28070_001 | UniProt:M0RM31 | InterPro:NAP-like_sf | InterPro:NAP_family | PFAM:PF00956 |
| PANTHER:PTHR11875 | PANTHER:PTHR11875:SF98 | SUPFAM:SSF143113 | SignalP:SignalP-noTM | UniParc:UPI000296158F | SEG:seg |
Description
NAP domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G28070_001]
Coordinates
chr10:-:30985063..30992278
Molecular Weight (calculated)
48772.4 Da
IEP (calculated)
4.276
GRAVY (calculated)
-0.972
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCKITHATH ASVFLFYFVS LTKSYGFPRS SLLISIKEEE EEKKRRRRLQ RRATMSSDKQ QDSLNLADLG SALSAEDRAG LVDALKNKLQ SLAGKHTDVL
101: ETLSPAVRKR VEVLREVQSQ HDELEAKFFE ERAALEAKYQ KLYEPLYTKR YEIVNGVVEV EGIKDESPEE TGSEDKASEE KGVPGFWLAA MKANEVLTEE
201: IQERDEEALK YLKDIKWCRI EDPKGFKLEF FFNPNPFFKN AVLTKTYHMI DEDEPILEKA IGTEIEWYPG KCLTQKILKK KPKKGSKNAK PITKTEDCES
301: FFNFFKPPQV PDDDADIDEE TAEELQGQME VDYDIGSTIK DKIIPHAVSW FTGEAVEGDE LEIEDEDEDD EEDEEEEEEE EDDDEDDEDE DEDEEDQTKT
401: KKKSATGQKK SGGEQAQRPA ECKQQ
101: ETLSPAVRKR VEVLREVQSQ HDELEAKFFE ERAALEAKYQ KLYEPLYTKR YEIVNGVVEV EGIKDESPEE TGSEDKASEE KGVPGFWLAA MKANEVLTEE
201: IQERDEEALK YLKDIKWCRI EDPKGFKLEF FFNPNPFFKN AVLTKTYHMI DEDEPILEKA IGTEIEWYPG KCLTQKILKK KPKKGSKNAK PITKTEDCES
301: FFNFFKPPQV PDDDADIDEE TAEELQGQME VDYDIGSTIK DKIIPHAVSW FTGEAVEGDE LEIEDEDEDD EEDEEEEEEE EDDDEDDEDE DEDEEDQTKT
401: KKKSATGQKK SGGEQAQRPA ECKQQ
001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ
Arabidopsis Description
NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.