Factsheet for HORVU7Hr1G064820.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G064790.1	Barley	nucleus	100.0	100.0
HORVU4Hr1G081230.2	Barley	nucleus	89.41	73.08
HORVU1Hr1G078730.1	Barley	nucleus	41.18	60.34
HORVU2Hr1G066940.1	Barley	nucleus	56.47	57.83
HORVU1Hr1G048890.1	Barley	nucleus	95.29	42.63
TraesCS7D01G096300.1	Wheat	nucleus	77.65	17.28
TraesCS4A01G401100.1	Wheat	nucleus	77.65	17.28
TraesCS7A01G102400.1	Wheat	nucleus	76.47	16.97
TraesCS3A01G357000.1	Wheat	mitochondrion	47.06	16.19
OQU75826	Sorghum	nucleus	71.76	16.01
Os06t0149400-01	Rice	nucleus	68.24	15.34
Zm00001d045352_P002	Maize	extracellular, mitochondrion	68.24	15.26
Zm00001d036177_P001	Maize	nucleus	63.53	14.71
GSMUA_Achr7P09020_001	Banana	nucleus	62.35	14.29
GSMUA_Achr6P00890_001	Banana	nucleus	60.0	13.78
HORVU2Hr1G033000.1	Barley	cytosol	36.47	12.76
Solyc03g121700.2.1	Tomato	nucleus	55.29	12.63
VIT_09s0002g02330.t01	Wine grape	nucleus	55.29	12.34
Bra027399.1-P	Field mustard	nucleus	40.0	12.32
CDX97517	Canola	nucleus	40.0	12.32
KRH10020	Soybean	nucleus	52.94	12.3
VIT_11s0016g02050.t01	Wine grape	nucleus	55.29	12.18
GSMUA_Achr2P16760_001	Banana	mitochondrion, nucleus	55.29	11.58
CDY23642	Canola	nucleus	40.0	11.56
GSMUA_Achr10P...	Banana	endoplasmic reticulum	56.47	11.29
AT3G13782.2	Thale cress	cytosol	40.0	10.73
HORVU1Hr1G080060.11	Barley	nucleus, plastid	50.59	10.44
KRH23302	Soybean	nucleus	40.0	10.21
HORVU6Hr1G051930.1	Barley	nucleus	20.0	6.72
PGSC0003DMT400006378	Potato	nucleus	11.76	3.98
HORVU7Hr1G111180.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G018340.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU7Hr1G064820.1	EnsemblPlantsGene:HORVU7Hr1G064820	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf	InterPro:NAP_family
PANTHER:PTHR11875	PANTHER:PTHR11875:SF101	PFAM:PF00956	SUPFAM:SSF143113	UniParc:UPI000B469072	UniProt:A0A287WQI5
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:321553332..321555235

Molecular Weight (calculated)

9552.1 Da

IEP (calculated)

4.390

GRAVY (calculated)

-0.622

Length

85 amino acids

Sequence
(BLAST)

1: MNGCDFKSRT GSRLDEIEGK FFEERVTLEA KYQKLYEPLY AKRYNIVNGV VEVDGVAQEP TSENAVEGGD SDSKGIPDFW LTALK

Best Arabidopsis Sequence Match ( AT2G19480.3 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.