CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045352_P002	Maize	extracellular, mitochondrion	92.65	92.89
Zm00001d036177_P001	Maize	nucleus	83.99	87.19
Os06t0149400-01	Rice	nucleus	83.46	84.13
TraesCS7A01G102400.1	Wheat	nucleus	83.99	83.55
TraesCS7D01G096300.1	Wheat	nucleus	83.46	83.25
TraesCS4A01G401100.1	Wheat	nucleus	82.94	82.72
HORVU1Hr1G048890.1	Barley	nucleus	40.94	82.11
GSMUA_Achr6P00890_001	Banana	nucleus	71.65	73.78
GSMUA_Achr7P09020_001	Banana	nucleus	71.13	73.05
VIT_09s0002g02330.t01	Wine grape	nucleus	72.7	72.7
KRH23302	Soybean	nucleus	62.99	72.07
HORVU7Hr1G064820.1	Barley	nucleus	16.01	71.76
HORVU7Hr1G064790.1	Barley	nucleus	16.01	71.76
VIT_11s0016g02050.t01	Wine grape	nucleus	72.7	71.76
Solyc03g121700.2.1	Tomato	nucleus	69.55	71.24
PGSC0003DMT400006378	Potato	nucleus	46.46	70.52
KRH10020	Soybean	nucleus	65.88	68.58
KXG22431	Sorghum	nucleus	65.62	66.84
GSMUA_Achr2P16760_001	Banana	mitochondrion, nucleus	70.08	65.76
GSMUA_Achr10P...	Banana	endoplasmic reticulum	71.13	63.76
HORVU4Hr1G081230.2	Barley	nucleus	16.01	58.65
Bra027399.1-P	Field mustard	nucleus	42.26	58.33
CDX97517	Canola	nucleus	42.26	58.33
CDY23642	Canola	nucleus	43.83	56.8
HORVU2Hr1G066940.1	Barley	nucleus	12.07	55.42
TraesCS3A01G357000.1	Wheat	mitochondrion	35.7	55.06
AT3G13782.2	Thale cress	cytosol	45.41	54.57
EES07035	Sorghum	cytosol	19.16	29.08
EES12291	Sorghum	cytosol	17.85	26.46
HORVU2Hr1G033000.1	Barley	cytosol	14.7	23.05

Protein Annotations

MapMan:12.2.6	Gene3D:3.30.1120.90	EntrezGene:8068788	UniProt:A0A1W0VRB9	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:NAP-like_sf	InterPro:NAP_family	EnsemblPlants:OQU75826	ProteinID:OQU75826	ProteinID:OQU75826.1	PFAM:PF00956
PANTHER:PTHR11875	PANTHER:PTHR11875:SF98	EnsemblPlantsGene:SORBI_3010G038800	SUPFAM:SSF143113	UniParc:UPI0001A88F99	RefSeq:XP_002436481.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:3085021..3089224

Molecular Weight (calculated)

43128.9 Da

IEP (calculated)

4.039

GRAVY (calculated)

-1.034

Length

381 amino acids

Sequence
(BLAST)

001: MGGEKETFDI SDLNASLPAA AAALSAEDRA GLVNALKDKL QSLAGQHADV LESLSPNVRK RVEFLREIQS QHDEIEAKFF EERAALEAKY QKLYEPLYTK
101: RYDIVNGVVE VDGVSDEPTS ENAAEGKEPD AKGVPDFWLT ALKTNEVLSE EIQERDEPAL KYLKDIKWSR IEDPKGFKLE FFFDTNPFFK NSVLTKTYHM
201: VDEDDPILEK AIGTDIDWYP GKNLTQKILK KKPKKGSKNT KPITKTEDCE SFFNFFNPPQ VPEDDEDIDE DTADELQGEM EHDYDIGTTI RDKIIPHAVS
301: WFTGEAVQGD DFADLGDDDE DDDEDDDDEE DEEDEDEDED DEEDDEEESK PARKSGSGRK HKGPQKVSQG NAEQPAECKQ Q

Best Arabidopsis Sequence Match ( AT2G19480.1 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.