Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045352_P002 | Maize | extracellular, mitochondrion | 88.28 | 85.26 |
| OQU75826 | Sorghum | nucleus | 87.19 | 83.99 |
| Os06t0149400-01 | Rice | nucleus | 80.11 | 77.78 |
| HORVU1Hr1G048890.1 | Barley | nucleus | 40.05 | 77.37 |
| TraesCS7A01G102400.1 | Wheat | nucleus | 79.56 | 76.24 |
| TraesCS7D01G096300.1 | Wheat | nucleus | 79.29 | 76.18 |
| TraesCS4A01G401100.1 | Wheat | nucleus | 79.02 | 75.92 |
| KRH23302 | Soybean | nucleus | 63.22 | 69.67 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 71.93 | 69.29 |
| GSMUA_Achr7P09020_001 | Banana | nucleus | 68.66 | 67.92 |
| Solyc03g121700.2.1 | Tomato | nucleus | 67.57 | 66.67 |
| GSMUA_Achr6P00890_001 | Banana | nucleus | 67.03 | 66.49 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 69.75 | 66.32 |
| KRH10020 | Soybean | nucleus | 65.94 | 66.12 |
| PGSC0003DMT400006378 | Potato | nucleus | 43.87 | 64.14 |
| Zm00001d038851_P001 | Maize | extracellular, mitochondrion | 64.58 | 64.05 |
| HORVU7Hr1G064790.1 | Barley | nucleus | 14.71 | 63.53 |
| HORVU7Hr1G064820.1 | Barley | nucleus | 14.71 | 63.53 |
| GSMUA_Achr2P16760_001 | Banana | mitochondrion, nucleus | 68.94 | 62.32 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 69.75 | 60.24 |
| CDX97517 | Canola | nucleus | 43.05 | 57.25 |
| Bra027399.1-P | Field mustard | nucleus | 42.78 | 56.88 |
| CDY23642 | Canola | nucleus | 44.96 | 56.12 |
| AT3G13782.2 | Thale cress | cytosol | 47.14 | 54.57 |
| HORVU2Hr1G066940.1 | Barley | nucleus | 12.26 | 54.22 |
| HORVU4Hr1G081230.2 | Barley | nucleus | 14.71 | 51.92 |
| TraesCS3A01G357000.1 | Wheat | mitochondrion | 34.33 | 51.01 |
| Zm00001d011130_P002 | Maize | nucleus | 55.31 | 47.99 |
| Zm00001d050874_P001 | Maize | extracellular | 19.07 | 27.89 |
| Zm00001d016935_P001 | Maize | extracellular | 18.8 | 26.74 |
| HORVU2Hr1G033000.1 | Barley | cytosol | 14.71 | 22.22 |
Protein Annotations
| EnsemblPlants:Zm00001d036177_P001 | EnsemblPlants:Zm00001d036177_T001 | EnsemblPlantsGene:Zm00001d036177 | Gene3D:3.30.1120.90 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:NAP-like_sf | InterPro:NAP_family | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF98 | PFAM:PF00956 | ProteinID:AQK80410.1 |
| SEG:seg | SUPFAM:SSF143113 | UniParc:UPI0008455A17 | UniProt:A0A1D6LL45 | MapMan:12.2.6 | : |
Description
Nucleosome assembly protein 1;2
Coordinates
chr6:+:75725163..75729993
Molecular Weight (calculated)
41582.8 Da
IEP (calculated)
4.053
GRAVY (calculated)
-0.831
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGENEPYVI SDLNASLPAA AAALSAEDRA GLVNALKDKL QSLAGQHADV LETLSPNVRK RVEFLRGIQS QHDEIEAKFF EERVALEAKY QKLYEPLYTK
101: RYEIVNGEVE VDGVSDEQTS DDTAEGKEPV AKGVPEFWLT AMKTNEVLSE EIQERDEAAL KYLKDIKWSR IEDPKGFKLD FFFDTNPFIK NSVLTKTYHM
201: VDEDDLILEK AIGTEIEWYP GKNLTQKILK KKPKKGSKNT KLITKTEDCE SFFNFFDPPQ VPEDDEDIDE DTAEELQGQM EHDYDIGTTI RDKIIPHAVS
301: WFTGEAVQGE DFANLGDDED DDDKDDDDEE EDEDEEGESK PARKLGLQLT SNMEPQEVLQ GNAEQPA
101: RYEIVNGEVE VDGVSDEQTS DDTAEGKEPV AKGVPEFWLT AMKTNEVLSE EIQERDEAAL KYLKDIKWSR IEDPKGFKLD FFFDTNPFIK NSVLTKTYHM
201: VDEDDLILEK AIGTEIEWYP GKNLTQKILK KKPKKGSKNT KLITKTEDCE SFFNFFDPPQ VPEDDEDIDE DTAEELQGQM EHDYDIGTTI RDKIIPHAVS
301: WFTGEAVQGE DFANLGDDED DDDKDDDDEE EDEDEEGESK PARKLGLQLT SNMEPQEVLQ GNAEQPA
001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ
Arabidopsis Description
NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.