Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97517 | Canola | nucleus | 73.19 | 84.06 |
| Bra027399.1-P | Field mustard | nucleus | 72.56 | 83.33 |
| CDY23642 | Canola | nucleus | 76.97 | 82.99 |
| Os01t0711800-00 | Rice | nucleus | 51.1 | 54.55 |
| Os05t0235600-00 | Rice | nucleus | 21.14 | 53.6 |
| Os06t0611700-00 | Rice | nucleus | 42.9 | 51.71 |
| KRH23302 | Soybean | nucleus | 52.68 | 50.15 |
| HORVU1Hr1G048890.1 | Barley | nucleus | 29.97 | 50.0 |
| GSMUA_Achr7P09020_001 | Banana | nucleus | 57.1 | 48.79 |
| Os05t0539700-01 | Rice | nucleus | 54.89 | 47.8 |
| KRH10020 | Soybean | nucleus | 54.89 | 47.54 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 57.1 | 47.51 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 57.73 | 47.41 |
| GSMUA_Achr6P00890_001 | Banana | nucleus | 55.2 | 47.3 |
| Zm00001d036177_P001 | Maize | nucleus | 54.57 | 47.14 |
| KXG22431 | Sorghum | nucleus | 55.52 | 47.06 |
| Zm00001d038851_P001 | Maize | extracellular, mitochondrion | 54.89 | 47.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.05 | 46.74 |
| TraesCS1B01G377000.1 | Wheat | nucleus | 52.68 | 46.52 |
| TraesCS1D01G364900.1 | Wheat | nucleus | 53.63 | 46.45 |
| PGSC0003DMT400021185 | Potato | nucleus | 47.63 | 46.18 |
| Zm00001d045352_P002 | Maize | extracellular, mitochondrion | 55.2 | 46.05 |
| Os06t0149400-01 | Rice | nucleus | 54.26 | 45.5 |
| OQU75826 | Sorghum | nucleus | 54.57 | 45.41 |
| PGSC0003DMT400012517 | Potato | nucleus | 49.84 | 45.27 |
| AT5G56950.1 | Thale cress | nucleus | 53.0 | 44.92 |
| AT4G26110.1 | Thale cress | nucleus | 52.68 | 44.89 |
| AT2G19480.1 | Thale cress | nucleus | 53.63 | 44.85 |
| TraesCS7D01G096300.1 | Wheat | nucleus | 53.31 | 44.24 |
| Solyc06g062690.2.1 | Tomato | nucleus | 48.58 | 44.13 |
| TraesCS7A01G102400.1 | Wheat | nucleus | 53.31 | 44.13 |
| GSMUA_Achr2P16760_001 | Banana | mitochondrion, nucleus | 56.47 | 44.09 |
| TraesCS4A01G401100.1 | Wheat | nucleus | 53.0 | 43.98 |
| Solyc08g063000.2.1 | Tomato | nucleus | 47.95 | 43.18 |
| TraesCS1A01G360500.1 | Wheat | nucleus | 53.63 | 42.82 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 55.2 | 41.18 |
| HORVU1Hr1G080060.11 | Barley | nucleus, plastid | 52.05 | 40.05 |
| HORVU7Hr1G064820.1 | Barley | nucleus | 10.73 | 40.0 |
| HORVU7Hr1G064790.1 | Barley | nucleus | 10.73 | 40.0 |
| HORVU2Hr1G066940.1 | Barley | nucleus | 10.41 | 39.76 |
| Zm00001d011130_P002 | Maize | nucleus | 47.32 | 35.46 |
| HORVU4Hr1G081230.2 | Barley | nucleus | 11.36 | 34.62 |
| TraesCS3A01G357000.1 | Wheat | mitochondrion | 26.18 | 33.6 |
| HORVU7Hr1G111180.1 | Barley | cytosol | 4.73 | 31.91 |
| AT1G18800.1 | Thale cress | cytosol | 21.14 | 26.17 |
| AT1G74560.3 | Thale cress | cytosol | 18.3 | 21.97 |
| HORVU2Hr1G033000.1 | Barley | cytosol | 11.36 | 14.81 |
Protein Annotations
| MapMan:12.2.6 | Gene3D:3.30.1120.90 | EntrezGene:820589 | UniProt:A0A178VHH5 | ProteinID:AEE75412.1 | ProteinID:ANM63955.1 |
| ArrayExpress:AT3G13782 | EnsemblPlantsGene:AT3G13782 | RefSeq:AT3G13782 | TAIR:AT3G13782 | RefSeq:AT3G13782-TAIR-G | EnsemblPlants:AT3G13782.2 |
| ProteinID:BAB01928.1 | UniProt:F4JEI8 | GO:GO:0000724 | GO:GO:0003674 | GO:GO:0003682 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006334 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0042393 | GO:GO:0046686 | InterPro:NAP-like_sf | InterPro:NAP_family |
| Symbol:NFA04 | RefSeq:NP_001319544.1 | RefSeq:NP_187993.2 | ProteinID:OAP04473.1 | PFAM:PF00956 | PANTHER:PTHR11875 |
| PANTHER:PTHR11875:SF99 | SUPFAM:SSF143113 | UniParc:UPI0001E92D38 | SEG:seg | : | : |
Description
NAP1;4NFA4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHH5]
Coordinates
chr3:+:4526556..4528646
Molecular Weight (calculated)
36419.7 Da
IEP (calculated)
4.268
GRAVY (calculated)
-0.647
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNEENIKSD NKSGDSSDLP TIPALDIGAE ECDLLAELKN LTLKRPFDVK KLSPKVTKRV LFLKDIQVTH DELEEKFLAE KSALEATYDN LYKPLFAKRY
101: EIVNGVVEAE AEKEGVPNFW LIAMKTNEML ANEITERDEA ALKYLKDIRS CRVEDTSRNF KLEFLFDSNL YFKNSVLSKT YHVNDEDGPV LEKVIGTDIE
201: WFPGKCLTHK VVVKKKTKKG PKKVNNIPMT KTENCESFFN FFKPPEIPEI DEVDDYDDFD TIMTEELQNL MDQDYDIAVT IRDKLIPHAV SWFTGEALVD
301: EDDSDDNDDD DNDEKSD
101: EIVNGVVEAE AEKEGVPNFW LIAMKTNEML ANEITERDEA ALKYLKDIRS CRVEDTSRNF KLEFLFDSNL YFKNSVLSKT YHVNDEDGPV LEKVIGTDIE
201: WFPGKCLTHK VVVKKKTKKG PKKVNNIPMT KTENCESFFN FFKPPEIPEI DEVDDYDDFD TIMTEELQNL MDQDYDIAVT IRDKLIPHAV SWFTGEALVD
301: EDDSDDNDDD DNDEKSD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.