Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50468 | Canola | nucleus | 95.45 | 94.44 |
| CDY50472 | Canola | nucleus | 92.78 | 92.78 |
| CDY50473 | Canola | nucleus | 44.38 | 88.3 |
| AT4G26110.1 | Thale cress | nucleus | 84.22 | 84.68 |
| AT2G19480.1 | Thale cress | nucleus | 75.94 | 74.93 |
| Bra002778.1-P | Field mustard | nucleus | 81.55 | 73.49 |
| KRH37411 | Soybean | nucleus | 71.39 | 73.15 |
| Solyc12g008940.1.1 | Tomato | nucleus | 72.19 | 72.19 |
| KRH12415 | Soybean | endoplasmic reticulum | 70.05 | 72.18 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 74.33 | 72.02 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 73.26 | 71.92 |
| PGSC0003DMT400055114 | Potato | nucleus | 70.86 | 70.86 |
| PGSC0003DMT400000751 | Potato | nucleus | 69.52 | 70.27 |
| Solyc05g018810.2.1 | Tomato | nucleus | 70.05 | 69.68 |
| KRH19202 | Soybean | nucleus | 69.79 | 69.6 |
| KRH02690 | Soybean | nucleus | 70.05 | 69.13 |
| AT3G13782.2 | Thale cress | cytosol | 44.92 | 53.0 |
| AT1G18800.1 | Thale cress | cytosol | 20.86 | 30.47 |
| AT1G74560.3 | Thale cress | cytosol | 17.11 | 24.24 |
Protein Annotations
| MapMan:12.2.6 | Gene3D:3.30.1120.90 | EntrezGene:835797 | ProteinID:AED96826.1 | EMBL:AF370487 | ArrayExpress:AT5G56950 |
| EnsemblPlantsGene:AT5G56950 | RefSeq:AT5G56950 | TAIR:AT5G56950 | RefSeq:AT5G56950-TAIR-G | EnsemblPlants:AT5G56950.1 | TAIR:AT5G56950.1 |
| EMBL:AY064641 | Unigene:At.22032 | ProteinID:BAA97025.1 | ncoils:Coil | GO:GO:0000724 | GO:GO:0003674 |
| GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006334 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009294 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016444 | GO:GO:0042393 | GO:GO:0042802 | InterPro:NAP-like_sf | InterPro:NAP_family | Symbol:NFA03 |
| RefSeq:NP_568844.1 | PFAM:PF00956 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF101 | UniProt:Q94K07 |
| SUPFAM:SSF143113 | UniParc:UPI000009D1E5 | SEG:seg | : | : | : |
Description
NAP1;3Nucleosome assembly protein 1;3 [Source:UniProtKB/Swiss-Prot;Acc:Q94K07]
Coordinates
chr5:+:23032449..23035693
Molecular Weight (calculated)
43295.7 Da
IEP (calculated)
4.152
GRAVY (calculated)
-1.131
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNDKDSFNV SDLTSALKDE DRAGLVNALK NKLQNLAGQH SDVLENLTPK IRRRVEVLRE IQGKHDEIET KFREERAALE AKYQKLYQPL YNKRYEIVNG
101: ATEVEGAPED AKMDQGDEKT AEEKGVPSFW LTALKNNDVI SEEITERDEG ALIYLKDIKW CKIEEPKGFK LEFFFDQNPY FKNTLLTKAY HMIDEDEPLL
201: EKAIGTEIDW YPGKCLTQKI LKKKPKKGAK NAKPITKTED CESFFNFFNP PQVPDDDEDI DEERAEELQN LMEQDYDIGS TIREKIIPHA VSWFTGEAIE
301: GEEFEIDNDD EDDIDEDEDE DEEDEDEDEE EDDEDEEEEV SKTKKKPSVL HKKGGRPQVT DDQQGERPPE CKQQ
101: ATEVEGAPED AKMDQGDEKT AEEKGVPSFW LTALKNNDVI SEEITERDEG ALIYLKDIKW CKIEEPKGFK LEFFFDQNPY FKNTLLTKAY HMIDEDEPLL
201: EKAIGTEIDW YPGKCLTQKI LKKKPKKGAK NAKPITKTED CESFFNFFNP PQVPDDDEDI DEERAEELQN LMEQDYDIGS TIREKIIPHA VSWFTGEAIE
301: GEEFEIDNDD EDDIDEDEDE DEEDEDEDEE EDDEDEEEEV SKTKKKPSVL HKKGGRPQVT DDQQGERPPE CKQQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.