Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g077660.1.1 | Tomato | cytosol | 18.18 | 76.19 |
| KRH65521 | Soybean | cytosol | 28.79 | 76.0 |
| AT1G18800.1 | Thale cress | cytosol | 72.35 | 74.61 |
| KRH16731 | Soybean | cytosol, mitochondrion, nucleus | 23.48 | 71.26 |
| KRH75776 | Soybean | cytosol | 24.62 | 68.42 |
| KRH65520 | Soybean | nucleus | 28.41 | 68.18 |
| CDY19242 | Canola | cytosol | 66.67 | 67.95 |
| Bra025687.1-P | Field mustard | cytosol | 59.09 | 66.95 |
| CDY26724 | Canola | cytosol | 63.26 | 66.01 |
| KRH63352 | Soybean | nucleus | 64.02 | 64.5 |
| KRH54545 | Soybean | nucleus | 64.02 | 64.02 |
| KRH56918 | Soybean | nucleus | 61.36 | 63.28 |
| KRH03467 | Soybean | nucleus | 60.98 | 62.4 |
| Solyc12g077670.1.1 | Tomato | cytosol | 21.59 | 61.96 |
| VIT_17s0000g06030.t01 | Wine grape | cytosol | 62.88 | 61.94 |
| PGSC0003DMT400083149 | Potato | cytosol | 59.85 | 60.54 |
| Solyc06g069890.2.1 | Tomato | nucleus | 59.47 | 60.15 |
| GSMUA_Achr10P... | Banana | nucleus | 58.33 | 59.92 |
| GSMUA_Achr6P10690_001 | Banana | nucleus | 56.44 | 58.43 |
| GSMUA_Achr4P00490_001 | Banana | cytosol | 56.44 | 58.2 |
| GSMUA_Achr7P21000_001 | Banana | cytosol | 55.3 | 57.94 |
| Os02t0576700-01 | Rice | extracellular | 55.3 | 57.94 |
| TraesCS6B01G227700.1 | Wheat | nucleus | 53.79 | 56.57 |
| TraesCS6A01G202200.1 | Wheat | nucleus | 53.41 | 56.18 |
| TraesCS6D01G185800.1 | Wheat | golgi | 53.41 | 56.18 |
| Solyc03g116170.2.1 | Tomato | cytosol | 53.79 | 56.13 |
| HORVU6Hr1G051930.1 | Barley | nucleus | 53.79 | 56.13 |
| EES07035 | Sorghum | cytosol | 53.03 | 55.78 |
| Zm00001d050874_P001 | Maize | extracellular | 52.27 | 54.98 |
| Zm00001d016935_P001 | Maize | extracellular | 51.89 | 53.1 |
| KRH49525 | Soybean | cytosol | 31.06 | 50.0 |
| TraesCS2B01G342400.1 | Wheat | cytosol | 47.73 | 49.8 |
| TraesCS2D01G323500.1 | Wheat | cytosol | 47.73 | 49.8 |
| TraesCS2A01G344900.1 | Wheat | cytosol | 47.35 | 49.41 |
| EES12291 | Sorghum | cytosol | 46.97 | 48.25 |
| PGSC0003DMT400050243 | Potato | nucleus | 51.52 | 47.89 |
| Os04t0459700-02 | Rice | nucleus | 46.59 | 47.49 |
| AT3G13782.2 | Thale cress | cytosol | 21.97 | 18.3 |
| AT2G19480.1 | Thale cress | nucleus | 24.62 | 17.15 |
| AT5G56950.1 | Thale cress | nucleus | 24.24 | 17.11 |
| AT4G26110.1 | Thale cress | nucleus | 23.11 | 16.4 |
Protein Annotations
| MapMan:12.2.8 | Gene3D:3.30.1120.90 | EntrezGene:843797 | ProteinID:AEE35611.1 | EMBL:AK316717 | ArrayExpress:AT1G74560 |
| EnsemblPlantsGene:AT1G74560 | RefSeq:AT1G74560 | TAIR:AT1G74560 | RefSeq:AT1G74560-TAIR-G | EnsemblPlants:AT1G74560.3 | TAIR:AT1G74560.3 |
| Unigene:At.48372 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:NAP-like_sf | InterPro:NAP_family |
| RefSeq:NP_001077822.1 | Symbol:NRP1 | PFAM:PF00956 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR11875 | PANTHER:PTHR11875:SF60 | SUPFAM:SSF143113 | UniParc:UPI00015056B5 | SEG:seg | : |
Description
NRP1NAP1-related protein 1 [Source:TAIR;Acc:AT1G74560]
Coordinates
chr1:-:28017584..28020049
Molecular Weight (calculated)
30643.6 Da
IEP (calculated)
4.988
GRAVY (calculated)
-0.678
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MVADKSKKSK IEEKGEEENL EQIDAELVLS IEKLQEIQDD LEKINEKASD EVLEVEQKYN VIRKPVYDKR NEVIQSIPGF WMTAFLSHPA LGDLLTEEDQ
101: KIFKYLNSLE VEDAKDVKSG YSITFHFTSN PFFEDAKLTK TFTFLEEGTT KITATPIKWK EGKGLPNGVN HDDKKGNKRA LPEESFFTWF TDAQHKEDAG
201: DEIHDEVADI IKEDLWMLMK RILMEMMMVT KREKKTMTMK RRKMVRNDGS PKITHCWLAS ITDV
101: KIFKYLNSLE VEDAKDVKSG YSITFHFTSN PFFEDAKLTK TFTFLEEGTT KITATPIKWK EGKGLPNGVN HDDKKGNKRA LPEESFFTWF TDAQHKEDAG
201: DEIHDEVADI IKEDLWMLMK RILMEMMMVT KREKKTMTMK RRKMVRNDGS PKITHCWLAS ITDV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.