Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83813 | Canola | cytosol | 79.05 | 79.05 |
| CDX96698 | Canola | cytosol | 78.26 | 78.26 |
| Solyc12g077660.1.1 | Tomato | cytosol | 18.58 | 74.6 |
| Bra025687.1-P | Field mustard | cytosol | 67.98 | 73.82 |
| KRH16731 | Soybean | cytosol, mitochondrion, nucleus | 24.9 | 72.41 |
| CDY19242 | Canola | cytosol | 73.52 | 71.81 |
| KRH65521 | Soybean | cytosol | 26.48 | 67.0 |
| KRH54545 | Soybean | nucleus | 68.77 | 65.91 |
| KRH63352 | Soybean | nucleus | 67.98 | 65.65 |
| KRH03467 | Soybean | nucleus | 64.82 | 63.57 |
| AT1G74560.3 | Thale cress | cytosol | 66.01 | 63.26 |
| KRH56918 | Soybean | nucleus | 63.64 | 62.89 |
| KRH75776 | Soybean | cytosol | 23.32 | 62.11 |
| VIT_17s0000g06030.t01 | Wine grape | cytosol | 65.61 | 61.94 |
| KRH65520 | Soybean | nucleus | 26.48 | 60.91 |
| GSMUA_Achr10P... | Banana | nucleus | 60.87 | 59.92 |
| TraesCS6B01G227700.1 | Wheat | nucleus | 57.71 | 58.17 |
| HORVU6Hr1G051930.1 | Barley | nucleus | 58.1 | 58.1 |
| Solyc03g116170.2.1 | Tomato | cytosol | 58.1 | 58.1 |
| TraesCS6D01G185800.1 | Wheat | golgi | 57.31 | 57.77 |
| TraesCS6A01G202200.1 | Wheat | nucleus | 57.31 | 57.77 |
| GSMUA_Achr6P10690_001 | Banana | nucleus | 58.1 | 57.65 |
| Solyc06g069890.2.1 | Tomato | nucleus | 59.29 | 57.47 |
| PGSC0003DMT400083149 | Potato | cytosol | 59.29 | 57.47 |
| GSMUA_Achr7P21000_001 | Banana | cytosol | 56.13 | 56.35 |
| Os02t0576700-01 | Rice | extracellular | 56.13 | 56.35 |
| GSMUA_Achr4P00490_001 | Banana | cytosol | 56.92 | 56.25 |
| Zm00001d050874_P001 | Maize | extracellular | 54.55 | 54.98 |
| Zm00001d016935_P001 | Maize | extracellular | 55.73 | 54.65 |
| EES07035 | Sorghum | cytosol | 54.15 | 54.58 |
| TraesCS2D01G323500.1 | Wheat | cytosol | 53.36 | 53.36 |
| TraesCS2A01G344900.1 | Wheat | cytosol | 52.96 | 52.96 |
| TraesCS2B01G342400.1 | Wheat | cytosol | 52.57 | 52.57 |
| Solyc12g077670.1.1 | Tomato | cytosol | 18.18 | 50.0 |
| Os04t0459700-02 | Rice | nucleus | 49.8 | 48.65 |
| EES12291 | Sorghum | cytosol | 49.01 | 48.25 |
| KRH49525 | Soybean | cytosol | 30.83 | 47.56 |
| PGSC0003DMT400050243 | Potato | nucleus | 50.99 | 45.42 |
| CDX89363 | Canola | nucleus | 28.06 | 19.4 |
| CDX97517 | Canola | nucleus | 20.95 | 19.2 |
| CDX94372 | Canola | nucleus | 26.48 | 18.26 |
| CDY50468 | Canola | nucleus | 27.27 | 18.25 |
| CDX82688 | Canola | nucleus | 26.88 | 17.89 |
| CDY50472 | Canola | nucleus | 26.09 | 17.65 |
| CDY60738 | Canola | nucleus | 26.48 | 17.54 |
| CDY50005 | Canola | nucleus | 24.11 | 17.38 |
| CDY23642 | Canola | nucleus | 20.16 | 17.35 |
| CDY21663 | Canola | nucleus | 22.92 | 16.62 |
| CDY65997 | Canola | nucleus | 5.53 | 16.47 |
| CDY50473 | Canola | nucleus | 11.86 | 15.96 |
| CDY69405 | Canola | nucleus | 23.32 | 15.86 |
| CDY67089 | Canola | nucleus | 23.32 | 15.73 |
| CDY52429 | Canola | nucleus | 9.88 | 8.45 |
Protein Annotations
| MapMan:12.2.8 | Gene3D:3.30.1120.90 | GO:A0A078GNA4 | UniProt:A0A078GNA4 | EnsemblPlants:CDY26724 | ProteinID:CDY26724 |
| ProteinID:CDY26724.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:GSBRNA2T00035630001 | InterPro:NAP-like_sf |
| InterPro:NAP_family | PFAM:PF00956 | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF60 | SUPFAM:SSF143113 | UniParc:UPI0004EEC6CA |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g12980DBnaA06g12980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNA4]
Coordinates
chrLK032193:+:343647..346126
Molecular Weight (calculated)
29305.2 Da
IEP (calculated)
3.991
GRAVY (calculated)
-1.108
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MVADKRKKAK IKKENVEQID GELVISIEKL QEIQDNLEKI NEKASDEVLE VDQKYNVIRK PVYDKRNEVI KAIPDLWLTA FLSHPALGEL LSEEDQKIFK
101: YLSSLDVDDA KYVKSGYSIT FYEKLTNTFT FLEEGTTKIT ATPIKWKEGK DLPNGVNHEK NRNKHALPEE RYGSFISSDA QHKEDLDVEI NDEQVADVIK
201: EDLWPNPLTY FNNEDDEEDF DEDDDDDDDD EDEEGKEGDS DEDDDEDDKD SEE
101: YLSSLDVDDA KYVKSGYSIT FYEKLTNTFT FLEEGTTKIT ATPIKWKEGK DLPNGVNHEK NRNKHALPEE RYGSFISSDA QHKEDLDVEI NDEQVADVIK
201: EDLWPNPLTY FNNEDDEEDF DEDDDDDDDD EDEEGKEGDS DEDDDEDDKD SEE
001: MVTDKSKKAK TEEENVEQID AELVLSIEKL QEIQDDLEKI NEKASDEVLE VEQKYNVIRK PVYDKRNEII KTIPDFWLTA FLSHPALGEL LTEEDQKIFK
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE
Arabidopsis Description
NRP2NRP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W8U0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.