Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
extracellular: 21246215 |
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G18800.1 | KRH53154 | AT5G09320.1 | 21798944 |
| AT1G18800.1 | KRH64753 | AT5G09320.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03467 | Soybean | nucleus | 94.92 | 94.19 |
| KRH65521 | Soybean | cytosol | 34.77 | 89.0 |
| KRH65520 | Soybean | nucleus | 34.38 | 80.0 |
| KRH75776 | Soybean | cytosol | 29.3 | 78.95 |
| KRH16731 | Soybean | cytosol, mitochondrion, nucleus | 25.0 | 73.56 |
| Solyc12g077660.1.1 | Tomato | cytosol | 17.97 | 73.02 |
| CDX83813 | Canola | cytosol | 71.09 | 71.94 |
| CDX96698 | Canola | cytosol | 71.09 | 71.94 |
| KRH63352 | Soybean | nucleus | 73.44 | 71.76 |
| Bra016541.1-P | Field mustard | cytosol | 65.23 | 71.37 |
| KRH54545 | Soybean | nucleus | 73.44 | 71.21 |
| AT1G18800.1 | Thale cress | cytosol | 70.7 | 70.7 |
| VIT_17s0000g06030.t01 | Wine grape | cytosol | 69.53 | 66.42 |
| GSMUA_Achr10P... | Banana | nucleus | 65.23 | 64.98 |
| CDY26724 | Canola | cytosol | 62.89 | 63.64 |
| PGSC0003DMT400083149 | Potato | cytosol | 62.89 | 61.69 |
| Solyc06g069890.2.1 | Tomato | nucleus | 62.89 | 61.69 |
| AT1G74560.3 | Thale cress | cytosol | 63.28 | 61.36 |
| GSMUA_Achr6P10690_001 | Banana | nucleus | 60.94 | 61.18 |
| GSMUA_Achr7P21000_001 | Banana | cytosol | 60.16 | 61.11 |
| CDY19242 | Canola | cytosol | 61.72 | 61.0 |
| KRH49525 | Soybean | cytosol | 39.06 | 60.98 |
| GSMUA_Achr4P00490_001 | Banana | cytosol | 60.94 | 60.94 |
| Solyc12g077670.1.1 | Tomato | cytosol | 21.88 | 60.87 |
| Solyc03g116170.2.1 | Tomato | cytosol | 58.59 | 59.29 |
| Bra025687.1-P | Field mustard | cytosol | 53.91 | 59.23 |
| TraesCS6B01G227700.1 | Wheat | nucleus | 57.81 | 58.96 |
| TraesCS6D01G185800.1 | Wheat | golgi | 57.42 | 58.57 |
| TraesCS6A01G202200.1 | Wheat | nucleus | 57.42 | 58.57 |
| EES07035 | Sorghum | cytosol | 57.42 | 58.57 |
| HORVU6Hr1G051930.1 | Barley | nucleus | 57.81 | 58.5 |
| Os02t0576700-01 | Rice | extracellular | 57.42 | 58.33 |
| Zm00001d050874_P001 | Maize | extracellular | 56.25 | 57.37 |
| Zm00001d016935_P001 | Maize | extracellular | 56.64 | 56.2 |
| TraesCS2B01G342400.1 | Wheat | cytosol | 53.91 | 54.55 |
| TraesCS2A01G344900.1 | Wheat | cytosol | 53.91 | 54.55 |
| TraesCS2D01G323500.1 | Wheat | cytosol | 53.91 | 54.55 |
| Os04t0459700-02 | Rice | nucleus | 52.34 | 51.74 |
| EES12291 | Sorghum | cytosol | 51.17 | 50.97 |
| PGSC0003DMT400050243 | Potato | nucleus | 51.95 | 46.83 |
| KRH23302 | Soybean | nucleus | 25.39 | 19.52 |
| KRH37411 | Soybean | nucleus | 27.34 | 19.18 |
| KRH12415 | Soybean | endoplasmic reticulum | 26.17 | 18.46 |
| KRH10020 | Soybean | nucleus | 26.17 | 18.31 |
| KRH19202 | Soybean | nucleus | 26.56 | 18.13 |
| KRH02690 | Soybean | nucleus | 26.56 | 17.94 |
Protein Annotations
| MapMan:12.2.8 | Gene3D:3.30.1120.90 | EMBL:ACUP02002802 | ncoils:Coil | EnsemblPlantsGene:GLYMA_05G027300 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | UniProt:I1JZQ1 | EnsemblPlants:KRH56918 | ProteinID:KRH56918 | ProteinID:KRH56918.1 | InterPro:NAP-like_sf |
| InterPro:NAP_family | PFAM:PF00956 | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF60 | SUPFAM:SSF143113 | UniParc:UPI000233A9E5 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:2366700..2370430
Molecular Weight (calculated)
29489.6 Da
IEP (calculated)
3.944
GRAVY (calculated)
-0.897
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGDNTKKLI VAENLEDSID GELVLSIEKL QEVQDELDKI NEEASDKVLE VEQKYNEIRK PVYDKRNEIV KSIPDFWFTA FMSHPALCDL LNVEDQKIFK
101: YLGSLDVEDN KDVKSGYSIT FNFNLNPYFE NAKLTKTFTF LEEGTTKITA TPIKWKEGKG LPNGVEHDKN GKKRARIDIS FFSWFSDCEQ KGDMDEIHDE
201: VAELIKDDLW PNPLTYFNNE LDEEDVEADD EENDEDDSED DDQEENDTGS EDGNNS
101: YLGSLDVEDN KDVKSGYSIT FNFNLNPYFE NAKLTKTFTF LEEGTTKITA TPIKWKEGKG LPNGVEHDKN GKKRARIDIS FFSWFSDCEQ KGDMDEIHDE
201: VAELIKDDLW PNPLTYFNNE LDEEDVEADD EENDEDDSED DDQEENDTGS EDGNNS
001: MVTDKSKKAK TEEENVEQID AELVLSIEKL QEIQDDLEKI NEKASDEVLE VEQKYNVIRK PVYDKRNEII KTIPDFWLTA FLSHPALGEL LTEEDQKIFK
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE
Arabidopsis Description
NRP2NRP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W8U0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.