CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23302	Soybean	nucleus	84.43	92.79
VIT_09s0002g02330.t01	Wine grape	nucleus	75.68	72.7
GSMUA_Achr6P00890_001	Banana	nucleus	71.31	70.54
VIT_11s0016g02050.t01	Wine grape	nucleus	73.5	69.69
KRH12415	Soybean	endoplasmic reticulum	68.85	69.42
GSMUA_Achr7P09020_001	Banana	nucleus	69.95	69.0
Os05t0539700-01	Rice	nucleus	68.58	68.96
Os01t0711800-00	Rice	nucleus	55.19	68.01
TraesCS1B01G377000.1	Wheat	nucleus	66.12	67.41
KRH37411	Soybean	nucleus	67.21	67.4
Zm00001d045352_P002	Maize	extracellular, mitochondrion	69.13	66.58
HORVU1Hr1G048890.1	Barley	nucleus	34.43	66.32
Os06t0611700-00	Rice	nucleus	47.54	66.16
TraesCS1D01G364900.1	Wheat	nucleus	66.12	66.12
Zm00001d036177_P001	Maize	nucleus	66.12	65.94
OQU75826	Sorghum	nucleus	68.58	65.88
Os06t0149400-01	Rice	nucleus	68.03	65.87
KRH19202	Soybean	nucleus	67.49	65.87
TraesCS7A01G102400.1	Wheat	nucleus	68.03	65.01
TraesCS7D01G096300.1	Wheat	nucleus	67.76	64.92
KRH02690	Soybean	nucleus	66.67	64.38
TraesCS4A01G401100.1	Wheat	nucleus	66.94	64.14
GSMUA_Achr2P16760_001	Banana	mitochondrion, nucleus	71.04	64.04
KXG22431	Sorghum	nucleus	65.3	63.9
GSMUA_AchrUn_...	Banana	nucleus	61.48	63.74
Zm00001d038851_P001	Maize	extracellular, mitochondrion	63.93	63.24
Os05t0235600-00	Rice	nucleus	21.58	63.2
PGSC0003DMT400012517	Potato	nucleus	58.2	61.03
TraesCS1A01G360500.1	Wheat	nucleus	66.12	60.96
CDX97517	Canola	nucleus	45.36	60.14
HORVU7Hr1G111180.1	Barley	cytosol	7.65	59.57
Bra027399.1-P	Field mustard	nucleus	44.81	59.42
GSMUA_Achr10P...	Banana	endoplasmic reticulum	68.31	58.82
CDY23642	Canola	nucleus	46.72	58.16
Solyc06g062690.2.1	Tomato	nucleus	55.19	57.88
Solyc08g063000.2.1	Tomato	nucleus	54.37	56.53
PGSC0003DMT400021185	Potato	nucleus	49.73	55.66
HORVU1Hr1G080060.11	Barley	nucleus, plastid	62.57	55.58
HORVU2Hr1G066940.1	Barley	nucleus	12.57	55.42
AT3G13782.2	Thale cress	cytosol	47.54	54.89
HORVU7Hr1G064790.1	Barley	nucleus	12.3	52.94
HORVU7Hr1G064820.1	Barley	nucleus	12.3	52.94
Zm00001d011130_P002	Maize	nucleus	55.74	48.23
TraesCS3A01G357000.1	Wheat	mitochondrion	30.05	44.53
HORVU4Hr1G081230.2	Barley	nucleus	12.02	42.31
KRH65521	Soybean	cytosol	8.74	32.0
KRH65520	Soybean	nucleus	9.56	31.82
KRH75776	Soybean	cytosol	7.92	30.53
KRH16731	Soybean	cytosol, mitochondrion, nucleus	6.83	28.74
KRH63352	Soybean	nucleus	20.49	28.63
KRH54545	Soybean	nucleus	20.49	28.41
KRH03467	Soybean	nucleus	18.85	26.74
KRH56918	Soybean	nucleus	18.31	26.17
KRH49525	Soybean	cytosol	10.66	23.78
HORVU2Hr1G033000.1	Barley	cytosol	13.39	20.16

Protein Annotations

EntrezGene:100778198	MapMan:12.2.6	Gene3D:3.30.1120.90	EMBL:ACUP02009116	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G024700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006334	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	UniProt:I1MD00	EnsemblPlants:KRH10020	ProteinID:KRH10020	ProteinID:KRH10020.1
InterPro:NAP-like_sf	InterPro:NAP_family	PFAM:PF00956	PANTHER:PTHR11875	PANTHER:PTHR11875:SF99	SUPFAM:SSF143113
UniParc:UPI000233B75C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:2000254..2004234

Molecular Weight (calculated)

41701.1 Da

IEP (calculated)

4.174

GRAVY (calculated)

-0.943

Length

366 amino acids

Sequence
(BLAST)

001: MSDLGSDLPA AAAALSAEDR AGLVNALKDK LQLLAGQHVD ILETLPPKVR QRVEILRDLQ SQHDEVEAKF LEERSKLEAK YQKLYEPLYT KRYEIVNGVV
101: EVEGVTNVAV PEEANKAAED KGVPEFWLTA MKTNEALAEE ITERDEGSLK YLKDIKWCRI DDPKGFKLEF YFDSNPYFKN SVLTKTYHMI EDDDPILEKA
201: IGTEIEWHPG KCLTQKILKK KPSKGSKNAK PITKTEKCES FFNFFNPPQV PEDDDDIDDD AVEELENLME HDYDIGSTIR DKIIPHAVSW FTGEAAQSDF
301: EDIDEDDYED EEGDDDDDED EDEDEDEEDE EEKKGKSKSK SKLQSGGRAI PGKDQPMERP PECKQQ

Best Arabidopsis Sequence Match ( AT2G19480.1 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.