Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400021185 | Potato | nucleus | 79.55 | 85.63 |
Solyc12g008940.1.1 | Tomato | nucleus | 60.51 | 56.95 |
KRH23302 | Soybean | nucleus | 52.84 | 55.86 |
Solyc03g121700.2.1 | Tomato | nucleus | 58.52 | 55.38 |
VIT_09s0002g02330.t01 | Wine grape | nucleus | 59.66 | 55.12 |
KRH10020 | Soybean | nucleus | 56.53 | 54.37 |
Solyc05g018810.2.1 | Tomato | nucleus | 57.95 | 54.26 |
VIT_11s0016g02050.t01 | Wine grape | nucleus | 59.38 | 54.15 |
CDX97517 | Canola | nucleus | 40.91 | 52.17 |
Bra027399.1-P | Field mustard | nucleus | 40.34 | 51.45 |
CDY23642 | Canola | nucleus | 42.33 | 50.68 |
Solyc06g062690.2.1 | Tomato | nucleus | 49.15 | 49.57 |
AT3G13782.2 | Thale cress | cytosol | 43.18 | 47.95 |
Solyc06g069890.2.1 | Tomato | nucleus | 21.02 | 28.35 |
Solyc02g067370.2.1 | Tomato | nucleus | 18.18 | 25.2 |
Solyc12g077670.1.1 | Tomato | cytosol | 6.53 | 25.0 |
Solyc03g116170.2.1 | Tomato | cytosol | 17.9 | 24.9 |
Solyc12g077660.1.1 | Tomato | cytosol | 3.98 | 22.22 |
Solyc02g021350.2.1 | Tomato | cytosol | 16.48 | 18.24 |
Protein Annotations
MapMan:12.2.6 | Gene3D:3.30.1120.90 | ncoils:Coil | GO:GO:0000724 | GO:GO:0003674 | GO:GO:0003682 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006334 | GO:GO:0006950 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0042393 | GO:GO:0046686 | UniProt:K4CL82 |
InterPro:NAP-like_sf | InterPro:NAP_family | PFAM:PF00956 | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF98 | SUPFAM:SSF143113 |
EnsemblPlantsGene:Solyc08g063000.2 | EnsemblPlants:Solyc08g063000.2.1 | UniParc:UPI000276B4C4 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr8:+:52499804..52502899
Molecular Weight (calculated)
40664.8 Da
IEP (calculated)
4.107
GRAVY (calculated)
-0.897
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDQVNTADA TIALSAEDRA DLVNAIKNKL HDLTRDHSAF LDKFPKNIRM RVDVLRDIQS QYNELEAQYL EEKAALEAKF HKLYEPLYNK RCEIVNGVGE
101: AGDESTVGEE TNESAGDKGI PHFWLLAMKN NEIIAKEITE KDEDALQYLK DIKWNRLDDA NGFKLEFFFE TNPYFSNNVL TKTYHMISED EHILENAIGT
201: EIEWFLGKCL TQKILKKKPK KGSNDTKLII KTEECESFFH FFDPPQLPED AEELDEETAE LLQGQMEQDY EIGSTIREKI IPHAVSWFTG EAVPIDDDEE
301: EGDDDEEEED YVEENDEEED DENEDEKGNE ENVKEKMAVK KLEDSKRSQT LN
101: AGDESTVGEE TNESAGDKGI PHFWLLAMKN NEIIAKEITE KDEDALQYLK DIKWNRLDDA NGFKLEFFFE TNPYFSNNVL TKTYHMISED EHILENAIGT
201: EIEWFLGKCL TQKILKKKPK KGSNDTKLII KTEECESFFH FFDPPQLPED AEELDEETAE LLQGQMEQDY EIGSTIREKI IPHAVSWFTG EAVPIDDDEE
301: EGDDDEEEED YVEENDEEED DENEDEKGNE ENVKEKMAVK KLEDSKRSQT LN
001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ
Arabidopsis Description
NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.