Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97517 | Canola | nucleus | 91.16 | 97.1 |
| Bra027399.1-P | Field mustard | nucleus | 89.8 | 95.65 |
| AT3G13782.2 | Thale cress | cytosol | 82.99 | 76.97 |
| Os01t0711800-00 | Rice | nucleus | 53.74 | 53.2 |
| Os06t0611700-00 | Rice | nucleus | 46.26 | 51.71 |
| HORVU1Hr1G048890.1 | Barley | nucleus | 32.31 | 50.0 |
| Os05t0235600-00 | Rice | nucleus | 21.09 | 49.6 |
| KRH23302 | Soybean | nucleus | 55.78 | 49.25 |
| CDY65997 | Canola | nucleus | 13.95 | 48.24 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 62.24 | 48.03 |
| GSMUA_Achr7P09020_001 | Banana | nucleus | 60.2 | 47.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.8 | 47.31 |
| KRH10020 | Soybean | nucleus | 58.16 | 46.72 |
| Os05t0539700-01 | Rice | nucleus | 57.82 | 46.7 |
| GSMUA_Achr6P00890_001 | Banana | nucleus | 58.5 | 46.49 |
| KXG22431 | Sorghum | nucleus | 58.84 | 46.26 |
| TraesCS1B01G377000.1 | Wheat | nucleus | 56.46 | 46.24 |
| CDY21663 | Canola | nucleus | 54.76 | 46.13 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 59.86 | 45.6 |
| PGSC0003DMT400012517 | Potato | nucleus | 54.08 | 45.56 |
| Zm00001d038851_P001 | Maize | extracellular, mitochondrion | 57.14 | 45.41 |
| TraesCS1D01G364900.1 | Wheat | nucleus | 56.46 | 45.36 |
| Solyc06g062690.2.1 | Tomato | nucleus | 53.74 | 45.27 |
| CDX94372 | Canola | nucleus | 56.46 | 45.23 |
| CDY67089 | Canola | nucleus | 57.48 | 45.07 |
| CDY50005 | Canola | nucleus | 53.74 | 45.01 |
| Zm00001d036177_P001 | Maize | nucleus | 56.12 | 44.96 |
| CDY69405 | Canola | nucleus | 56.8 | 44.89 |
| PGSC0003DMT400021185 | Potato | nucleus | 49.66 | 44.65 |
| CDX89363 | Canola | nucleus | 55.1 | 44.26 |
| CDY50468 | Canola | nucleus | 56.8 | 44.18 |
| Zm00001d045352_P002 | Maize | extracellular, mitochondrion | 56.8 | 43.95 |
| OQU75826 | Sorghum | nucleus | 56.8 | 43.83 |
| CDY60738 | Canola | nucleus | 56.8 | 43.72 |
| CDX82688 | Canola | nucleus | 56.46 | 43.68 |
| Os06t0149400-01 | Rice | nucleus | 56.12 | 43.65 |
| CDY50473 | Canola | nucleus | 27.89 | 43.62 |
| GSMUA_Achr2P16760_001 | Banana | mitochondrion, nucleus | 59.86 | 43.35 |
| CDY50472 | Canola | nucleus | 55.1 | 43.32 |
| Solyc08g063000.2.1 | Tomato | nucleus | 50.68 | 42.33 |
| TraesCS1A01G360500.1 | Wheat | nucleus | 56.46 | 41.81 |
| TraesCS7A01G102400.1 | Wheat | nucleus | 54.42 | 41.78 |
| TraesCS7D01G096300.1 | Wheat | nucleus | 54.08 | 41.62 |
| TraesCS4A01G401100.1 | Wheat | nucleus | 53.74 | 41.36 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 58.5 | 40.47 |
| HORVU7Hr1G064820.1 | Barley | nucleus | 11.56 | 40.0 |
| HORVU7Hr1G064790.1 | Barley | nucleus | 11.56 | 40.0 |
| HORVU1Hr1G080060.11 | Barley | nucleus, plastid | 54.76 | 39.08 |
| HORVU2Hr1G066940.1 | Barley | nucleus | 10.88 | 38.55 |
| Zm00001d011130_P002 | Maize | nucleus | 50.68 | 35.22 |
| TraesCS3A01G357000.1 | Wheat | mitochondrion | 27.55 | 32.79 |
| HORVU4Hr1G081230.2 | Barley | nucleus | 11.56 | 32.69 |
| HORVU7Hr1G111180.1 | Barley | cytosol | 4.76 | 29.79 |
| CDY52429 | Canola | nucleus | 28.23 | 28.04 |
| CDX96698 | Canola | cytosol | 23.13 | 26.88 |
| CDX83813 | Canola | cytosol | 23.13 | 26.88 |
| CDY19242 | Canola | cytosol | 20.41 | 23.17 |
| CDY26724 | Canola | cytosol | 17.35 | 20.16 |
| HORVU2Hr1G033000.1 | Barley | cytosol | 11.9 | 14.4 |
Protein Annotations
| MapMan:12.2.6 | Gene3D:3.30.1120.90 | GO:A0A078GEW7 | UniProt:A0A078GEW7 | EnsemblPlants:CDY23642 | ProteinID:CDY23642 |
| ProteinID:CDY23642.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:GSBRNA2T00023870001 | InterPro:NAP-like_sf |
| InterPro:NAP_family | PFAM:PF00956 | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF99 | SUPFAM:SSF143113 | UniParc:UPI0004EE50AA |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g39520DBnaC05g39520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEW7]
Coordinates
chrLK032145:+:600536..602288
Molecular Weight (calculated)
33881.7 Da
IEP (calculated)
4.489
GRAVY (calculated)
-0.707
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNEENITSI EAVHNSGGDS SNALGNFNLT IKRTFDTKKL SPKVTKRVLF LKDIQVKHDE LEEKFLEEKA ALEAKYDSLY KPLFDKRYEI VNGVAEAETE
101: KGVPNFWLIA MKTNEMLANE ITERDEGALK YLKDIRCCRV ENNSRNFKLE FLFDPNPYFK NSVLSKTYHV TDDDDDGPVL DKVIGTDIEW CPGKCLTHKV
201: VVKKRPKKGS KKVNNIPMTK TENCESFFNF FKPPEIDEVD ECYTTMDEEL QNLTDQDYDI AVTIRDKLIP HAVSWFTGEA LVDEDEYNDD ENDD
101: KGVPNFWLIA MKTNEMLANE ITERDEGALK YLKDIRCCRV ENNSRNFKLE FLFDPNPYFK NSVLSKTYHV TDDDDDGPVL DKVIGTDIEW CPGKCLTHKV
201: VVKKRPKKGS KKVNNIPMTK TENCESFFNF FKPPEIDEVD ECYTTMDEEL QNLTDQDYDI AVTIRDKLIP HAVSWFTGEA LVDEDEYNDD ENDD
001: MSNEENIKSD NKSGDSSDLP TIPALDIGAE ECDLLAELKN LTLKRPFDVK KLSPKVTKRV LFLKDIQVTH DELEEKFLAE KSALEATYDN LYKPLFAKRY
101: EIVNGVVEAE AEKEGVPNFW LIAMKTNEML ANEITERDEA ALKYLKDIRS CRVEDTSRNF KLEFLFDSNL YFKNSVLSKT YHVNDEDGPV LEKVIGTDIE
201: WFPGKCLTHK VVVKKKTKKG PKKVNNIPMT KTENCESFFN FFKPPEIPEI DEVDDYDDFD TIMTEELQNL MDQDYDIAVT IRDKLIPHAV SWFTGEALVD
301: EDDSDDNDDD DNDEKSD
101: EIVNGVVEAE AEKEGVPNFW LIAMKTNEML ANEITERDEA ALKYLKDIRS CRVEDTSRNF KLEFLFDSNL YFKNSVLSKT YHVNDEDGPV LEKVIGTDIE
201: WFPGKCLTHK VVVKKKTKKG PKKVNNIPMT KTENCESFFN FFKPPEIPEI DEVDDYDDFD TIMTEELQNL MDQDYDIAVT IRDKLIPHAV SWFTGEALVD
301: EDDSDDNDDD DNDEKSD
Arabidopsis Description
NAP1;4NFA4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHH5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.