Factsheet for HORVU2Hr1G066940.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G064820.1	Barley	nucleus	57.83	56.47
HORVU7Hr1G064790.1	Barley	nucleus	57.83	56.47
HORVU1Hr1G078730.1	Barley	nucleus	36.14	51.72
HORVU4Hr1G081230.2	Barley	nucleus	56.63	45.19
HORVU1Hr1G048890.1	Barley	nucleus	59.04	25.79
TraesCS3A01G357000.1	Wheat	mitochondrion	44.58	14.98
TraesCS4A01G401100.1	Wheat	nucleus	59.04	12.83
HORVU2Hr1G033000.1	Barley	cytosol	37.35	12.76
KRH10020	Soybean	nucleus	55.42	12.57
TraesCS7D01G096300.1	Wheat	nucleus	57.83	12.57
Os06t0149400-01	Rice	nucleus	56.63	12.43
TraesCS7A01G102400.1	Wheat	nucleus	56.63	12.27
Zm00001d036177_P001	Maize	nucleus	54.22	12.26
OQU75826	Sorghum	nucleus	55.42	12.07
GSMUA_Achr7P09020_001	Banana	nucleus	53.01	11.86
Zm00001d045352_P002	Maize	extracellular, mitochondrion	54.22	11.84
Solyc03g121700.2.1	Tomato	nucleus	53.01	11.83
GSMUA_Achr6P00890_001	Banana	nucleus	51.81	11.62
CDX97517	Canola	nucleus	38.55	11.59
Bra027399.1-P	Field mustard	nucleus	37.35	11.23
VIT_11s0016g02050.t01	Wine grape	nucleus	51.81	11.14
VIT_09s0002g02330.t01	Wine grape	nucleus	50.6	11.02
CDY23642	Canola	nucleus	38.55	10.88
GSMUA_Achr2P16760_001	Banana	mitochondrion, nucleus	51.81	10.59
AT3G13782.2	Thale cress	cytosol	39.76	10.41
KRH23302	Soybean	nucleus	40.96	10.21
GSMUA_Achr10P...	Banana	endoplasmic reticulum	50.6	9.88
HORVU1Hr1G080060.11	Barley	nucleus, plastid	46.99	9.47
HORVU1Hr1G018340.1	Barley	cytosol	2.41	6.9
HORVU6Hr1G051930.1	Barley	nucleus	20.48	6.72
HORVU7Hr1G111180.1	Barley	cytosol	2.41	4.26
PGSC0003DMT400006378	Potato	nucleus	9.64	3.19

Protein Annotations

EnsemblPlants:HORVU2Hr1G066940.1	EnsemblPlantsGene:HORVU2Hr1G066940	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf	InterPro:NAP_family
PANTHER:PTHR11875	PANTHER:PTHR11875:SF101	PFAM:PF00956	SUPFAM:SSF143113	UniParc:UPI000B4602E1	UniProt:A0A287I9X4
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:467290024..467291990

Molecular Weight (calculated)

9432.1 Da

IEP (calculated)

4.482

GRAVY (calculated)

-0.448

Length

83 amino acids

Sequence
(BLAST)

1: MNGCDFKSRT RSRLDEIEGK FLVERVALEA KYQKLYEPFY AKRYNIVNVV VEVDGIAQEP TSENVAEGGD SDAKGIPDFW LTL

Best Arabidopsis Sequence Match ( AT2G19480.3 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.