Factsheet for HORVU1Hr1G080060.11

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G078730.1	Barley	nucleus	13.84	98.28
HORVU7Hr1G111180.1	Barley	cytosol	11.16	97.87
Os05t0539700-01	Rice	nucleus	75.0	84.89
Zm00001d038851_P001	Maize	extracellular, mitochondrion	70.87	78.92
KXG22431	Sorghum	nucleus	71.12	78.34
VIT_09s0002g02330.t01	Wine grape	nucleus	61.89	66.93
VIT_11s0016g02050.t01	Wine grape	nucleus	62.62	66.84
HORVU1Hr1G048890.1	Barley	nucleus	30.58	66.32
PGSC0003DMT400006378	Potato	nucleus	40.05	65.74
KRH23302	Soybean	nucleus	52.67	65.17
Solyc03g121700.2.1	Tomato	nucleus	58.5	64.78
GSMUA_AchrUn_...	Banana	nucleus	55.1	64.31
KRH10020	Soybean	nucleus	55.58	62.57
Zm00001d011130_P002	Maize	nucleus	59.47	57.92
CDX97517	Canola	nucleus	37.62	56.16
Bra027399.1-P	Field mustard	nucleus	37.38	55.8
CDY23642	Canola	nucleus	39.08	54.76
AT3G13782.2	Thale cress	cytosol	40.05	52.05
HORVU7Hr1G064820.1	Barley	nucleus	10.44	50.59
HORVU7Hr1G064790.1	Barley	nucleus	10.44	50.59
HORVU2Hr1G066940.1	Barley	nucleus	9.47	46.99
HORVU4Hr1G081230.2	Barley	nucleus	10.68	42.31
HORVU1Hr1G018340.1	Barley	cytosol	2.91	41.38
HORVU6Hr1G051930.1	Barley	nucleus	16.02	26.09
HORVU2Hr1G033000.1	Barley	cytosol	12.14	20.58

Protein Annotations

EnsemblPlants:HORVU1Hr1G080060.11	EnsemblPlantsGene:HORVU1Hr1G080060	Gene3D:3.30.1120.90	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf
InterPro:NAP_family	PANTHER:PTHR11875	PANTHER:PTHR11875:SF98	PFAM:PF00956	SEG:seg	SUPFAM:SSF143113
UniParc:UPI000B4778E7	UniProt:A0A287GF99	MapMan:12.2.6	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:524416247..524419507

Molecular Weight (calculated)

47202.2 Da

IEP (calculated)

4.446

GRAVY (calculated)

-1.124

Length

412 amino acids

Sequence
(BLAST)

001: SLPPRPPPLH SPHAQQSAPP TPHPHAPPPL GFLTHAASLA GGARISSSSH ERRQGHPRPL RPWRRRPQRR RELSAEDKAN LVESIKNTLQ GLAARHTDVL
101: ESLEPKVRKR VEALREIQSQ HDEFEAKFFE ERAALEAKYQ KMYEPLYSKR HDVVNGVVEV EGVTKDVSGE AAADQKEEVG VPDFWLNAMK NHEILAEEIQ
201: ERDEEALKYL KDIKWYRITE PKGFKLEFHF NTNPFFKNDV LTKTYHMIDE DEPILEKAIG TEIEWYPGKS LTQKVLKKKP KKGSKNTKPI TKIENCESFF
301: NFFSPPQVPD DDEEIDEDTA EQLQNQMEQD YDIGSTIRDK IIPHAVSWFT GEAAQDEDFD GMMDDDDEDD EDDDEEDEDE DEDDEEDEDD DDGDKKKGGR
401: VPAGEGQQGE RP

Best Arabidopsis Sequence Match ( AT2G19480.3 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.