Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0711800-00 | Rice | nucleus | 55.52 | 65.99 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 71.1 | 65.88 |
| Os06t0611700-00 | Rice | nucleus | 49.01 | 65.78 |
| KRH23302 | Soybean | nucleus | 61.47 | 65.17 |
| Os05t0539700-01 | Rice | nucleus | 66.86 | 64.84 |
| GSMUA_Achr7P09020_001 | Banana | nucleus | 67.42 | 64.15 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 69.97 | 63.99 |
| TraesCS1B01G377000.1 | Wheat | nucleus | 64.02 | 62.95 |
| PGSC0003DMT400006378 | Potato | nucleus | 44.76 | 62.95 |
| TraesCS1D01G364900.1 | Wheat | nucleus | 65.16 | 62.84 |
| GSMUA_Achr6P00890_001 | Banana | nucleus | 65.72 | 62.7 |
| Os05t0235600-00 | Rice | nucleus | 22.1 | 62.4 |
| Solyc03g121700.2.1 | Tomato | nucleus | 65.72 | 62.37 |
| KXG22431 | Sorghum | nucleus | 66.01 | 62.3 |
| Zm00001d038851_P001 | Maize | extracellular, mitochondrion | 64.87 | 61.89 |
| KRH10020 | Soybean | nucleus | 63.74 | 61.48 |
| HORVU7Hr1G111180.1 | Barley | cytosol | 7.93 | 59.57 |
| CDX97517 | Canola | nucleus | 46.18 | 59.06 |
| Bra027399.1-P | Field mustard | nucleus | 45.61 | 58.33 |
| TraesCS1A01G360500.1 | Wheat | nucleus | 65.16 | 57.93 |
| GSMUA_Achr2P16760_001 | Banana | mitochondrion, nucleus | 66.01 | 57.39 |
| CDY23642 | Canola | nucleus | 47.31 | 56.8 |
| HORVU1Hr1G080060.11 | Barley | nucleus, plastid | 64.31 | 55.1 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 66.29 | 55.06 |
| AT3G13782.2 | Thale cress | cytosol | 46.74 | 52.05 |
| Zm00001d011130_P002 | Maize | nucleus | 57.79 | 48.23 |
| GSMUA_Achr4P00490_001 | Banana | cytosol | 20.96 | 28.91 |
| GSMUA_Achr10P... | Banana | nucleus | 20.96 | 28.79 |
| GSMUA_Achr6P10690_001 | Banana | nucleus | 19.83 | 27.45 |
| GSMUA_Achr7P21000_001 | Banana | cytosol | 19.55 | 27.38 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP11090_001 | EnsemblPlants:GSMUA_AchrUn_randomT11090_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG11090_001 | Gene3D:3.30.1120.90 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:NAP-like_sf | InterPro:NAP_family | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF98 | PFAM:PF00956 | SEG:seg |
| SUPFAM:SSF143113 | UniParc:UPI0002959B86 | UniProt:M0U868 | MapMan:12.2.6 | : | : |
Description
Putative Nucleosome assembly protein 1-like 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG11090_001]
Coordinates
chrchrUn_random:-:53973955..53979326
Molecular Weight (calculated)
40222.2 Da
IEP (calculated)
4.174
GRAVY (calculated)
-0.887
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGDKDSNLN LSDLSSALPS ASRTALSARD RAGVVEAIKS KVEGLAEQHP VMLDSLAPKV RKRVEALRAI QSQYDDLEAN FFVEKAALEA KYQKLYEPLY
101: IKRYEIVNGA VEVEGVTDEA LTTDATEEKG VPDFWLTAMR TNEVLAEEIQ ERDAGALKFL KDIKWCRTDN PKGFKLDFFF DVNPYFKNSV LTKTYQMIDD
201: DDEPVLEKAI GTEIEWYPGK CLTQKVLKKK PRKGSKNTKP ITRTENCESF FNFFSPPQFP DDDDDDDEID EDTAEHLQNQ LEQDYDIGTT IRDKIIPHAV
301: SWFTGEAVPE DDYEDMEEDD DDEDGANDED DKEKGENDAD DDEKEGKTRK KIH
101: IKRYEIVNGA VEVEGVTDEA LTTDATEEKG VPDFWLTAMR TNEVLAEEIQ ERDAGALKFL KDIKWCRTDN PKGFKLDFFF DVNPYFKNSV LTKTYQMIDD
201: DDEPVLEKAI GTEIEWYPGK CLTQKVLKKK PRKGSKNTKP ITRTENCESF FNFFSPPQFP DDDDDDDEID EDTAEHLQNQ LEQDYDIGTT IRDKIIPHAV
301: SWFTGEAVPE DDYEDMEEDD DDEDGANDED DKEKGENDAD DDEKEGKTRK KIH
001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ
Arabidopsis Description
NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.