Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0611700-00 | Rice | nucleus | 92.8 | 44.11 |
| Os01t0711800-00 | Rice | nucleus | 88.8 | 37.37 |
| PGSC0003DMT400006378 | Potato | nucleus | 54.4 | 27.09 |
| KRH23302 | Soybean | nucleus | 65.6 | 24.62 |
| Os05t0539700-01 | Rice | nucleus | 69.6 | 23.9 |
| CDX97517 | Canola | nucleus | 49.6 | 22.46 |
| Bra027399.1-P | Field mustard | nucleus | 48.8 | 22.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 62.4 | 22.1 |
| Os06t0149400-01 | Rice | nucleus | 65.6 | 21.69 |
| KRH10020 | Soybean | nucleus | 63.2 | 21.58 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 66.4 | 21.5 |
| AT3G13782.2 | Thale cress | cytosol | 53.6 | 21.14 |
| CDY23642 | Canola | nucleus | 49.6 | 21.09 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 60.0 | 19.68 |
| Solyc03g121700.2.1 | Tomato | nucleus | 56.8 | 19.09 |
| Os04t0459700-02 | Rice | nucleus | 17.6 | 8.49 |
| Os02t0576700-01 | Rice | extracellular | 15.2 | 7.54 |
Protein Annotations
| EnsemblPlants:Os05t0235600-00 | EnsemblPlantsGene:Os05g0235600 | Gene3D:3.30.1120.90 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:NAP-like_sf |
| InterPro:NAP_family | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF98 | PFAM:PF00956 | ProteinID:BAS92937.1 | SEG:seg |
| SUPFAM:SSF143113 | UniParc:UPI000393B602 | UniProt:A0A0N7KKD8 | MapMan:12.2.6 | : | : |
Description
Similar to Nucleosome assembly protein 1-like protein 2. (Os05t0235600-00)
Coordinates
chr5:+:8301019..8303268
Molecular Weight (calculated)
14518.2 Da
IEP (calculated)
3.792
GRAVY (calculated)
-0.971
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: PILEKAIGTE IEWHLGYCLT QQVLTKESSE STKPITKTEE CESFFNFFSP PQVPDDDAKN DEYTVKLHNQ MERDYDIAST LRDKIIPHAV SWFTREAVQD
101: EDYGASWVDD EEEDDDDDEY SDEEA
101: EDYGASWVDD EEEDDDDDEY SDEEA
001: MSNDKDSFNV SDLTSALKDE DRAGLVNALK NKLQNLAGQH SDVLENLTPK IRRRVEVLRE IQGKHDEIET KFREERAALE AKYQKLYQPL YNKRYEIVNG
101: ATEVEGAPED AKMDQGDEKT AEEKGVPSFW LTALKNNDVI SEEITERDEG ALIYLKDIKW CKIEEPKGFK LEFFFDQNPY FKNTLLTKAY HMIDEDEPLL
201: EKAIGTEIDW YPGKCLTQKI LKKKPKKGAK NAKPITKTED CESFFNFFNP PQVPDDDEDI DEERAEELQN LMEQDYDIGS TIREKIIPHA VSWFTGEAIE
301: GEEFEIDNDD EDDIDEDEDE DEEDEDEDEE EDDEDEEEEV SKTKKKPSVL HKKGGRPQVT DDQQGERPPE CKQQ
101: ATEVEGAPED AKMDQGDEKT AEEKGVPSFW LTALKNNDVI SEEITERDEG ALIYLKDIKW CKIEEPKGFK LEFFFDQNPY FKNTLLTKAY HMIDEDEPLL
201: EKAIGTEIDW YPGKCLTQKI LKKKPKKGAK NAKPITKTED CESFFNFFNP PQVPDDDEDI DEERAEELQN LMEQDYDIGS TIREKIIPHA VSWFTGEAIE
301: GEEFEIDNDD EDDIDEDEDE DEEDEDEDEE EDDEDEEEEV SKTKKKPSVL HKKGGRPQVT DDQQGERPPE CKQQ
Arabidopsis Description
NAP1;3Nucleosome assembly protein 1;3 [Source:UniProtKB/Swiss-Prot;Acc:Q94K07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.